Phosphoproteome -Collins et al 2014
Collins MO, Wright JC, Jones M, Rayner JC, Choudhary JS. Confident and sensitive phosphoproteomics using combinations of collision induced dissociation and electron transfer dissociation. J Proteomics. 2014 103C:1-14. PMID: 24657495
PfID Annotation Phosphorylation sites EC Transcript
Replication and DNA metabolism PF3D7_1429900
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ATP-dependent DNA helicase, putative S682 S805 3.6.4.12
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PF3D7_0827000 DEAD/DEAH box ATP-dependent RNA helicase, putative S1174 S934 3.6.4.13
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PF3D7_1426100 basic transcription factor 3b, putative S169 S5 T145
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PF3D7_1146600
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CCAAT-box DNA binding protein subunit B S159
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PF3D7_1023900
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chromodomain-helicase-DNA-binding protein 1 homolog S139 S1812 S1921 S2531 S2740 S3107 S3281 S3283 T2384 T941 3.6.4.12
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PF3D7_0526800 conserved Plasmodium protein, unknown function
PF3D7_1227600 conserved plasmodium protein, unknown functio S435 S629 S982
PF3D7_0513600
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deoxyribodipyrimidine photolyase (photoreactivating enzyme, DNA photolyase), putative S3 S510 4.1.99.3
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PF3D7_1343400 DNA repair protein RAD5 S496 3.6.4.12
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PF3D7_1357500 DNA helicase, putative S884 3.6.4.12
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PF3D7_0411900 DNA polymerase alpha S1163|S1171 2.7.7.7
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PF3D7_0630300 DNA polymerase epsilon, catalytic subunit a S1331 S1350 S1381 S1467 S2578 T1390|T1392 2.7.7.7
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PF3D7_0107800 DNA repair exonuclease Mre11, putative S457 3.1.11.-
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PF3D7_1011700 DNA repair protein RAD23, putative S353
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PF3D7_0803400 DNA repair and recombination protein rad54, putative S1058 3.6.4.12
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PF3D7_0505500
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DNA mismatch repair protein MSH6, putative S238 S239 S256 S258
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PF3D7_1433500
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DNA topoisomerase II, putative S1288 S1325 5.99.1.3
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PF3D7_1106700 DNA replication ATP-dependent helicase/nuclease dna2, putative S84 3.6.4.12
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PF3D7_1010200 DNA2/NAM7 helicase. putative S1622 3.6.4.12
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PF3D7_0203300 ERCC1 nucleotide excision repair protein S3 3.1.21.1
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PF3D7_0725000 exonuclease I, putative S1243 T230 3.1.16.1
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PF3D7_0408500 flap endonuclease 1 S431 S503|S507 S597 3.2.2.17
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PF3D7_0514100
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ATP-dependent DNA helicase UvrD S858 3.6.4.12
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PF3D7_1417800
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DNA replication licensing factor MCM2 S13 S43 S903|S905 3.6.4.12
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PF3D7_1317100 DNA replication licensing factor MCM4 S202 S68 S797 S804
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PF3D7_1355100
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DNA replication licensing factor MCM6 S2 S26
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PF3D7_0527000 DNA replication licensing factor MCM3, putative S23 S5
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PF3D7_0527000 DNA replication licensing factor MCM3, putative
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PF3D7_0705400 DNA replication licensing factor MCM7, putative T154
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PF3D7_1349800 nucleolar preribosomal associated cytoplasmiATPase, putative S344
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PF3D7_0705300 origin recognition complex subunit 2, putative S460 T21
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PF3D7_0219600
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replication factor subunit 1, putative S104 S116 S118 S149|S153 S313
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PF3D7_0904800 replication protein A1, small fragment RPA S123 S249 S263
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PF3D7_1106000
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RuvB DNA helicase, putative S12 3.6.4.12
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PF3D7_0820000
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Snf2-related CBP activator, putative S461 S508 S533
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PF3D7_0820000
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Snf2-related CBP activator, putative
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PF3D7_0610900 transcription elongation factor spt5, putative S16 S42 S512
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PF3D7_1143100 AP2 domain transcription factor AP2-o, putative S677
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PF3D7_0420300 transcription factor with AP2 domain(s) S1874 S2034
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PF3D7_0516800 AP2 domain transcription factor AP2-O2, putative S1797 S2016
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PF3D7_0613800 AP2 domain transcription factor, putative S1216 S1303 S1498 S1756 S2770 S2815 S2917 S697|S698 S761 T2971
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PF3D7_1007700 AP2 domain transcription factor, putative S388 S735 S857 S907|S913 S913 T942
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PF3D7_1139300 AP2 domain transcription factor, putative S1971 S1972
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PF3D7_1222400 AP2 domain transcription factor T1413
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PF3D7_1239200 transcription factor with AP2 domain(s) S114 S1745 S1890 S1938 S1941 S1988 S2347
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PF3D7_1456000 AP2 domain transcription factor, putative S1152
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PF3D7_1466400 AP2 domain transcription factor AP2-SP S468 S571 S625 S670
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PF3D7_1449500 AP2 domain transcription factor, putative S10
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PF3D7_1030000 transcription elongation factor spt4, putative S26
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PF3D7_1415000
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uracil-DNA glycosylase, putative S43 S43 S47 T314 3.2.2.27
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PF3D7_1201500 XPA binding protein 1, putative S114
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PF3D7_1205500 zinc finger protein, putative S1363
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Transcription and RNA metabolism PF3D7_0305600
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AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative S193 S250 S64 4.2.99.18
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PF3D7_0209800
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ATP-dependent RNA helicase UAP56 S3 S48 S79 T54 3.6.4.13
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PF3D7_0321600 ATP-dependent RNA helicase, S4 3.6.4.13
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PF3D7_0602100 ATP-dependent RNA helicase, putative S148 3.6.4.13
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PF3D7_1118500 nucleolar protein 56, putative S473|S476
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PF3D7_1033700
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bromodomain protein, putative S286 S484
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PF3D7_0804000 cactin homolog, putative S534 S534|S556 S556
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PF3D7_0811300 CCR4-associated factor 1 S821
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PF3D7_1103800 CCR4-NOT transcription complex subunit 1, putative S1953|S1956
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PF3D7_1235300 CCR4-NOT transcription complex subunit 4, putative S73 S74
PF3D7_1238300 pre-mRNA-splicing factor CWC22, putative S688
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PF3D7_0507600 cell differentiation protein, putative S108 S108
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PF3D7_0619400
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cell division cycle protein 48 homologue S720 S720 T817
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PF3D7_1442400 conserved Plasmodium protein, unknown function S1433
PF3D7_0317700 CPSF (cleavage and polyadenylation specififactor), subunit A, putative S1740 S2058 S2229 S356 S589 S946
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PF3D7_1251500 DEAD/DEAH box ATP-dependent RNA helicase S23|S27 S45 3.6.4.13
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PF3D7_1302700 DEAD/DEAH box ATP-dependent RNA helicase, putative S728 3.6.4.13
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PF3D7_1418900 DEAD/DEAH box ATP-dependent RNA helicase S676 S725 3.6.4.13
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PF3D7_0903400 ATP-dependent RNA helicase ddx60, putative S628 S823|S824 S898 3.6.4.13
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PF3D7_0318200 DNA-directed RNA polymerase II subunit RPB1 S1675 S1766 S2377 T2163|S2165 2.7.7.6
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PF3D7_0303300 DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative S50 2.7.7.6
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PF3D7_0703500
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erythrocyte membrane-associated antigen S1013 S1015 S1568 S1772 S1871 S727 Y325
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PF3D7_0909700 FHA domain protein, putative S601
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PF3D7_1307800
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fork head domain protein, putative S266 S296 S296
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PF3D7_1202900
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high mobility group protein B1 S26
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PF3D7_1354300 large subunit rRNA methyltransferase S656 2.1.1.-
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PF3D7_1405800 ribosome biogenesis protein BOP1 S1294
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PF3D7_1127300 tRNA (guanine-N(7)-)-methyltransferase, putative S62 2.1.1.33
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PF3D7_1235500 mRNA methyltransferase, putative S638 2.1.1.62
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PF3D7_1032100
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mRNA-decapping enzyme subunit 1, putative S155 S169
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PF3D7_1128200
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multiprotein bridging factor type 1, putative S132
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PF3D7_1319300 tRNA (guanine(26)-n(2))-dimethyltransferase, putative, N2,N2-dimethylguanosine tRNA methyltransferase, putative S255 2.1.1.216
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PF3D7_1417200 NOT family protein, putative S1039|S1042 S2803
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PF3D7_0722600 U3 small nucleolar RNA-associated protein 7 S190
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PF3D7_1224300
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polyadenylate-binding protein, putative S101|T103 S125 S145 S171 S276 S276 S408 S408
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PF3D7_1107300 polyadenylate-binding protein-interacting protein 1, putative S1069 S137 S151 S1659 S1715 S1735 S1737 S1764 S1770 S2003 S2006 S2060|S2063
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PF3D7_1022400
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serine/arginine-rich splicing factor 4 S10 S368|S377 S432|S438 S48 S91
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PF3D7_1132600 pre-mRNA splicing factor, putative S192 S193
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PF3D7_1220100 pre-mRNA-processing factor 17 S13
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PF3D7_1402700 u2 snrnp-associated surp motif-containing protein, putative S530|S536
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PF3D7_1407300 pre-mRNA-splicing factor 38B, putative S535 S543
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PF3D7_0508700 ATP-dependent RNA helicase, S12 3.6.4.13
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PF3D7_1110200 pre-mRNA-processing factor 6, putative S1026 S1266 T881
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PF3D7_0218700 pre-mRNA-processing protein 45, putative S233 S233|S241
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PF3D7_0405400 pre-mRNA-processing-splicing factor 8, putative S1796 S1815 S2760 S851
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PF3D7_0517300
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serine/arginine-rich splicing factor 1 S17 S21
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PF3D7_1231600 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative S363 3.6.4.13
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PF3D7_1030100
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pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative S133 S319 S528 S86 3.6.4.13
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PF3D7_0917600
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ATP-dependent RNA helicase, putative S2 3.6.4.13
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PF3D7_0422500 pre-mRNA-splicing helicase BRR2, putative S2195 S556 S603 3.6.4.13
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PF3D7_0717400 queuine tRNA-ribosyltransferase, S2 2.4.2.29
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PF3D7_1005500 regulator of nonsense transcripts, putative S39
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PF3D7_0615400 ribonuclease, putative S1493 S1525 S1596 S1685 S1872 S2285 S615 S885 S957 3.1.13.1
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PF3D7_1133800 RNA (uracil-5-)methyltransferase, putative S234 2.1.1.35
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PF3D7_1409800 RNA binding protein Bruno, putative S362
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PF3D7_0416000 RNA binding protein, putative S52
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PF3D7_0605100 RNA binding protein, putative S19 S19 S22 S354
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PF3D7_0716000 RNA binding protein, putative S124|S135 S135 S487|S491
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PF3D7_0728900 RNA binding protein, putative S449
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PF3D7_0812500 RNA binding protein, putative S125 S20 S302 S414 S498|S502 S50 S778 S851
PF3D7_0823200 S45 S45
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PF3D7_0923900 RNA binding protein, putative S130 S36
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PF3D7_0929200 RNA binding protein, putative S10
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PF3D7_1002400 transformer-2 protein homolog beta, putative S10 S182 S2|S3|S10
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PF3D7_1004400 RNA binding protein, putative S173 S303 S339 S34|S38 S340 S375 S421 S425 S465 S508 S599 S64 S64|S66 S649 S66 S685 S706 S745 S749 S788|S793 S840 S852 S876 T597|S599 T657
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PF3D7_1006800 single-strand telomeric dna-binding protein gbp2, putative S205 S92 S92
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PF3D7_1454000 RNA binding protein, putative S250
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PF3D7_1445200 RNA helicase, putative S764 3.6.4.13
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PF3D7_1340600 RNA lariat debranching enzyme, putative S325 3.1.4.-
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PF3D7_1129400 rRNA (cytosine-C(5))-methyltransferase, putative S2 2.1.1.-
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PF3D7_0511500 RNA pseudouridylate synthase, putative S6836 S6877 S7273 S7547|S7550 S7556 S7733 S7873 S8563 S9206 S9850 5.4.99.12
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PF3D7_0515000 RNA binding protein, putative S55
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PF3D7_0916700 RNA-binding protein musashi, putative S163 S24|S34 S273 S3 S34 S42 S82|S89 S89 S95 T152 T203
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PF3D7_1359400
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Cugbp Elav-like family member 1 S135 S61 T67
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PF3D7_0802300 rRNA processing WD-repeat protein, putative S852
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PF3D7_0503300
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serine/arginine-rich splicing factor 12 S130|S132 S169 S24
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PF3D7_0629700
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SET domain protein, putative S213 S244 S2929 S3090 S310|S313 S3488 S3601 S4239 T3575 2.1.1.43
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PF3D7_1125500
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small nuclear ribonucleoprotein Sm D1, putative T95
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PF3D7_1469300 pre-rRNA-processing protein pno1, putative S33
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PF3D7_1027100 u3 small nucleolar ribonucleoprotein protein mpp10, putative S136
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PF3D7_1474500 splicing factor 3A subunit 1, putative S391 S453
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PF3D7_0308900 splicing factor 3B subunit 1, putative S135 S146
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PF3D7_1461600 splicing factor 3B subunit 2, putative S93
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PF3D7_1234800 Splicing factor 3B subunit 3, putative S210 S870
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PF3D7_1123900
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splicing factor, putative S10|S14
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PF3D7_1321700 splicing factor 1 S172|S175 S27 S29
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PF3D7_0714500 transcription elongation factor s-II, putative S102 S322
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PF3D7_0407300 transcription factor, putative S26
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PF3D7_0506200
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tata-box-binding protein S50
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PF3D7_1428800 transcription initiation TFIID-like, putative S145
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PF3D7_0623600 transcription or splicing factor-like protein, putative S105
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PF3D7_1014600 transcriptional coactivator ADA2 S1063 S2107 S2220 S2238 S2492 T2266 T2433
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PF3D7_1307900 tripartite motif protein, putative S590
PF3D7_0912800 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6, putative S197 2.1.1.220
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PF3D7_1407500 multifunctional methyltransferase subunit TRM112, putative T5 2.1.1.32
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PF3D7_0704200 tRNA m5C-methyltransferase, putative S1008 2.1.1.29
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PF3D7_1136300
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tudor staphylococcal nuclease S674 S674 3.1.31.1
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PF3D7_1369700 U2 small nuclear ribonucleoprotein A', putative T67
PF3D7_1035000 U2 snRNA/tRNA pseudouridine synthase, S329 5.4.99.12
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PF3D7_1468800 splicing factor u2af large subunit, putative S244|S246
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PF3D7_1307100 U3 small nucleolar RNA-associated protein 6, putative S912 S912
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PF3D7_1333600 U3 small nucleolar RNA-associated protein 4 S239
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PF3D7_1357700 u3 small nucleolar rna-associated protein 21 S917
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PF3D7_0409100 U4/U6 small nuclear ribonucleoprotein PRP31, putative S494|T500
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PF3D7_0323700 U4/U6.U5 tri-snRNP-associated protein 1, putative S116 S178 S400 S557
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PF3D7_1317000 U4/U6.U5 tri-snRNP-associated protein 2 S29 S413
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PF3D7_1003800 U5 small nuclear ribonucleoprotein component, putative S925
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PF3D7_0315800 zinc finger protein, putative S133
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PF3D7_0525000 zinc finger protein, putative S537 S7
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PF3D7_1443800 pre-mrna-splicing factor cwc24 S73
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PF3D7_1450400 zinc finger protein, putative S12
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Translation PF3D7_0307100 40S ribosomal protein S12, putative S140S2 S90
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PF3D7_1358800 40S ribosomal protein S13, putative S31 S48
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PF3D7_0516200 40s ribosomal protein s11 T13 T8
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PF3D7_1317800 40s ribosomal protein s19 S29
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PF3D7_1242700 40S ribosomal protein S17, putative S89
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PF3D7_1126200 40S ribosomal protein S18, putative S2
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PF3D7_1447000 40S ribosomal protein S5 S250 S256 S33
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PF3D7_1447000 40S ribosomal protein S5 S250 S256 S33
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PF3D7_1003500 40S ribosomal protein S20e, putative S67
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PF3D7_1026800
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40s ribosomal protein s2 S2 T220 T250
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PF3D7_1465900 40S ribosomal protein S3 S210 S84 T216
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PF3D7_0322900 40S ribosomal protein S3A, putative S239 S249 S87 T119
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PF3D7_0721600 40S ribosomal protein S5, putative S161
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PF3D7_1342000 40S ribosomal protein S6, putative S15 S217
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PF3D7_1302800 40S ribosomal protein S7, putative S11 S14 T118
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PF3D7_1408600 40S ribosomal protein S8e, putative S62 T36
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PF3D7_0520000 40S ribosomal subunit protein S9, putative S152 S162
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PF3D7_1441200 60S ribosomal protein L1, putative S14
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PF3D7_1414300 60S ribosomal protein L10, putative S177 T140
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PF3D7_0517000 60S ribosomal protein L12, putative S38 S38
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PF3D7_1004000 60S ribosomal protein L13, putative S76
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PF3D7_0814000 60S ribosomal protein L13-2, putative S121 T147 T61 T75
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PF3D7_0415900 60S ribosomal protein L15, putative S16
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PF3D7_1341300 60S ribosomal protein L18-2, putative S84
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PF3D7_1426000 60s ribosomal protein L21 S147
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PF3D7_1323400 60S ribosomal protein L23 S102 S175
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PF3D7_1309100 60S ribosomal protein L24, putative S106
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PF3D7_0312800 60S ribosomal protein L26, putative S35
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PF3D7_1460700 60S ribosomal protein L27 S95
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PF3D7_1142500 60S ribosomal protein L28, putative S2 S71 S98 S98
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PF3D7_1027800 60S ribosomal protein L3, putative S13 S216 S31 S344 S360
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PF3D7_0507100 60S ribosomal protein L4 S295 S318 S63
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PF3D7_1424100 60S ribosomal protein L5, putative S58
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PF3D7_1338200 60S ribosomal protein L6-2, putative S5
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PF3D7_0307200 60S ribosomal protein L7, putative S262S16 S66
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PF3D7_1130200
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60S ribosomal protein P0 S283
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PF3D7_1103100
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60S acidiribosomal protein P1, putative S3 S91
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PF3D7_0729300 60s ribosomal export protein nmd3 S21
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PF3D7_0506100 60s ribosomal subunit protein L24, putative S64
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PF3D7_1367700
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alanine-tRNA ligase, putative S558 6.1.1.7
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PF3D7_0729400 Ribosome biogenesis protein BRX1 homolog, putative T26
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PF3D7_1244800 cytoplasmic translation machinery associated protein, putative T294
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PF3D7_1412600
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deoxyhypusine synthase S15 2.5.1.46
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PF3D7_0319600 elongation factor 1-delta, putative T4
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PF3D7_1357000
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elongation factor 1-alpha S128 S192 S273 S277 S363 S382 S385 S426 T157 T213 T255
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PF3D7_0913200 elongation factor 1-beta S21
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PF3D7_1451100
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elongation factor 2 S392 S488
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PF3D7_1468700
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eukaryotic initiation factor 4A/helicase 45 S2|T3 S381 S40 T129 T18 T313 3.6.4.12
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PF3D7_1312900 eukaryotitranslation initation factor 4 gamma, putative S316 S489 S66
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PF3D7_0728000 eukaryotic translation initiation factor 2 alpha subunit, putative S56 S85
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PF3D7_1010600 eukaryotic translation initiation factor 2 beta subunit, putative S23
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PF3D7_1410600 eukaryotic translation initiation factor 2 gamma subunit, putative S56
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PF3D7_0716800 eukaryotic translation initiation factor 3 37.28 kDa subunit, putative S191
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PF3D7_1212700 eukaryotic translation initiation factor 3 subunit a, putative S1029 S121 S1355 S268 S285 T677
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PF3D7_0918300 eukaryotitranslation initiation factor 3 subunit 5, putative S13
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PF3D7_1007900 eukaryotitranslation initiation factor 3 subunit 7, putative S68
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PF3D7_1206200 eukaryotic translation initiation factor 3 subunit 8, putative S560
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PF3D7_1204300
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eukaryotic translation initiation factor 5A S15 S2 S76
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PF3D7_1438000 eukaryotic translation initiation factor eIF2A, putative S219
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PF3D7_0815600 eukaryotitranslation initiation factor, putative S18
PF3D7_1407100
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fibrillarin, putative S173|S176
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PF3D7_1349200 glutamate-tRNA ligase, putative S428 T581 6.1.1.17
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PF3D7_1331700 glutamine--tRNA ligase, putative S796 6.1.1.18
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PF3D7_1332900
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isoleucine-tRNA ligase, putative S346 6.1.1.5