Genes coding for components of the proteasome degradation machinery & their timed transcription
Component
Gene ID Annotated function (Yeast ortholog; curator's comment) E.C Transcript
19 S regulatory particle Lid subuint PF3D7_1338100 26S proteasome regulatory subunit RPN3, putative
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PF3D7_1017900 26S proteasome regulatory subunit p55, putative 3.4.25.1
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PF3D7_1402300
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26S proteasome regulatory subunit RPN6
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PF3D7_1129200 26S proteasome regulatory subunit RPN7, putative
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PF3D7_0912900 26S proteasome regulatory subunit RPN8, putative
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PF3D7_1030500 26S proteasome regulatory subunit RPN9, putative 3.4.25.1
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PF3D7_1368100 26S proteasome regulatory subunit RPN11, putative
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PF3D7_0312300 26S proteasome regulatory subunit RPN12, putative 3.4.25.1
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Base subunits PF3D7_0205900 26S proteasome regulatory subunit RPN1, putative
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PF3D7_1466300 26S proteasome regulatory subunit RPN2, putative 3.4.25.1
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PF3D7_0807800 26S proteasome regulatory subunit RPN10, putative
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PF3D7_1414000 26S proteasome regulatory subunit RPN13, putative
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PF3D7_1311500
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26S protease regulatory subunit 7, putative; 26S proteasome AAA-ATPase subunit RPT1, putative 3.6.4.8
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PF3D7_1008400
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26S protease regulatory subunit 4, putative 3.6.4.8
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PF3D7_0413600
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26S protease regulatory subunit 6B, putative; 26S proteasome AAA-ATPase subunit RPT3 3.6.4.8
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PF3D7_1306400
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26S protease regulatory subunit 10B, putative; 26S proteasome AAA-ATPase subunit RPT4, putative 3.6.4.8
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PF3D7_1130400
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26S protease regulatory subunit 6A, putative 3.6.4.8
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PF3D7_1248900
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26S protease regulatory subunit 8, putative 3.6.4.8
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20 S core protease PF3D7_0807500 proteasome subunit alpha type-6, putative 3.4.25.1
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PF3D7_0608500 proteasome subunit alpha type-2, putative 3.4.25.1
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PF3D7_1353800 proteasome subunit alpha type-4, putative 3.4.25.1
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PF3D7_1353900 proteasome subunit alpha type-7, putative 3.4.25.1
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PF3D7_0727400
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proteasome subunit alpha type-5, putative 3.4.25.1
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PF3D7_1474800 proteasome subunit alpha type-1, putative 3.4.25.1
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PF3D7_0317000 proteasome subunit alpha type-3, putative 3.4.25.1
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PF3D7_0931800
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proteasome subunit beta type-6, putative 3.4.25.1
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PF3D7_1328100 proteasome subunit beta type-7, putative 3.4.25.1
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PF3D7_0108000 proteasome subunit beta type-3, putative 3.4.25.1
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PF3D7_1470900
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proteasome subunit beta type-2, putative 3.4.25.1
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PF3D7_1011400
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proteasome subunit beta type-5 3.4.25.1
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PF3D7_0518300
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proteasome subunit beta type-1, putative 3.4.25.1
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PF3D7_0803800
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proteasome subunit beta type-4 3.4.25.1
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Ubiquitin activating enzyme E1 PF3D7_1237000
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SUMO-activating enzyme subunit 2 6.2.1.45
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PF3D7_1225800
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ubiquitin-activating enzyme E1 6.2.1.45
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PF3D7_1333200
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ubiquitin-activating enzyme 6.2.1.45
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PF3D7_0817000 NEDD8-activating enzyme E1 catalytic subunit, putative 6.2.1.45
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PF3D7_1350400 ubiquitin-activating enzyme E1, putative
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PF3D7_1144500 SUMO-activating enzyme subunit 1
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PF3D7_1126100 autophagy-related protein 7, putative
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PF3D7_1365400 ubiquitin-activating enzyme 6.2.1.45
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Ubiquitin-conjugating enzyme E2 PF3D7_1203900
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ubiquitin-conjugating enzyme E2 2.3.2.23
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PF3D7_0921000 ubiquitin-conjugating enzyme E2, putative 2.3.2.23
PF3D7_0305700 ubiquitin-conjugating enzyme E2, putative 6.3.2.19
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PF3D7_0319300 ubiquitin-conjugating enzyme E2, putative 2.3.2.23
PF3D7_0527100 ubiquitin-conjugating enzyme E2 N, putative 6.3.2.19
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PF3D7_0606200 ubiquitin-conjugating enzyme E2 PEX4, putative 2.3.2.23
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PF3D7_0812600 ubiquitin-conjugating enzyme E2, putative 2.3.2.23
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PF3D7_1345500
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ubiquitin-conjugating enzyme E2 6.3.2.19
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PF3D7_1033900 ubiquitin-conjugating enzyme e2, putative 2.3.2.23
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PF3D7_1356300 ubiquitin-conjugating enzyme E2, putative 2.3.2.23
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PF3D7_1412900 ubiquitin-conjugating enzyme E2, putative 2.3.2.23
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PF3D7_1243700
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ubiquitin-conjugating enzyme E2, putative 6.3.2.19
Ubiquitin-protein ligase E3 PF3D7_0826100 HECT-like E3 ubiquitin ligase, putative 6.3.2.19
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PF3D7_0319100 E3 ubiquitin-protein ligase RBX1, putative 6.3.2.19
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PF3D7_0627300 E3 ubiquitin-protein ligase RNF5, putative 6.3.2.19
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PF3D7_1012000 ring zinc finger protein, putative 6.3.2.19
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PF3D7_0707700 E3 ubiquitin-protein ligase, putative 6.3.2.19
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PF3D7_0704600 E3 ubiquitin-protein ligase 6.3.2.19
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PF3D7_0826500 ubiquitin conjugation factor E4 B, putative 6.3.2.19
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PF3D7_1119400 ubiquitin-protein ligase, putative 6.3.2.19
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PF3D7_0628100
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HECT-domain (ubiquitin-transferase), putative 6.3.2.19
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PF3D7_1028200 ring zinc finger protein, putative
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PF3D7_0215100 RING zinc finger protein, putative
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PF3D7_1233600 asparagine and aspartate rich protein 1
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PF3D7_0312100
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E3 ubiquitin-protein ligase, putative 6.3.2.19
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PF3D7_0316900
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E3 ubiquitin-protein ligase, putative 6.3.2.19
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Ubiquitin PolyUbiquitin PF3D7_1211800 polyubiquitin
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Ubiquitin PF3D7_1314800
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ubiquitin-like protein, putative
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PF3D7_0922100
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ubiquitin-like protein, putative
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PF3D7_1365900
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ubiquitin-60S ribosomal protein L40
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PF3D7_0815700
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ubiquitin
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PF3D7_1117100 deubiquinating/deneddylating enzyme 3.4.19.12
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Ubiquitin thioesterase PF3D7_0726500 ubiquitin carboxyl-terminal hydrolase, putative 3.4.19.12
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PF3D7_0403500 ubiquitin specific protease, putative 3.1.2.15
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PF3D7_1414700 ubiquitin carboxyl-terminal hydrolase, putative 3.4.19.12
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PF3D7_0904600 ubiquitin specific protease, putative 3.4.19.12
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Ubiquitinyl hydrolase PF3D7_0413900 ubiquitin carboxyl-terminal hydrolase 13, putative 3.4.19.12
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PF3D7_0516700 ubiquitin carboxyl-terminal hydrolase 2, putative 3.4.19.12
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PF3D7_0527200
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ubiquitin carboxyl-terminal hydrolase 14 3.4.19.12
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PF3D7_0726500 ubiquitin carboxyl-terminal hydrolase, putative 3.4.19.12
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PF3D7_1117100 deubiquinating/deneddylating enzyme 3.4.19.12
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PF3D7_0104300 ubiquitin carboxyl-terminal hydrolase 1, putative 3.4.19.12
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PF3D7_1460400
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ubiquitin carboxyl-terminal hydrolase isozyme L3 3.4.19.12
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PF3D7_0413900 ubiquitin carboxyl-terminal hydrolase 13, putative 3.4.19.12
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PF3D7_0722300 ubiquitin carboxyl-terminal hydrolase, putative 3.4.19.12
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Regulators PF3D7_1011700 DNA repair protein RAD23, putative
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Dsk2 PF3D7_1113400 ubiquitin domain-containing protein DSK2, putative
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PF3D7_1132000 ubiquitin-like protein, putative
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PF3D7_1409300 DNA damage-inducible protein 1, putative 3.4.23.-
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PF3D7_1435700 ataxin-2 like protein, putative
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PF3D7_1226800 ataxin-3, putative 3.4.19.12
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PF3D7_0907700 proteasome activator 28 subunit beta, putative
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PF3D7_0317800 26s proteasome non-atpase regulatory subunit 9, putative
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PF3D7_1238100 calcyclin binding protein, putative
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PF3D7_0629800 cullin-like protein, putative
PF3D7_0811000 cullin-1, putative
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PF3D7_1367000 suppressor of kinetochore protein 1, putative
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PF3D7_0418200 eukaryotic translation initiation factor 3 subunit m, putative
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PF3D7_0808300 ubiquitin regulatory protein, putative
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PF3D7_0505800
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small ubiquitin-related modifier
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PF3D7_1138100 ubiquitin-related modifier 1, putative
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PF3D7_1141700 OTU domain-containing protein, putative
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PF3D7_1233900 sentrin-specific protease 1 3.4.22.68
PF3D7_0801700 sentrin-specific protease 2, putative 3.4.22.68
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PF3D7_1237800
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ubiquitin-like modifier HUB1, putative
Online articles related to Genes coding for components of the proteasome degradation machinery & their timed transcription retrieved from PubMed