Transcription related proteins encoding genes
Adapted from Bischoff E, Vaquero C. In silico and biological survey of transcription-associated proteins implicated in the transcriptional machinery during the erythrocytic development of Plasmodium falciparum. BMC Genomics. 2010 11:34.PMID: 20078850
Classes Sub-classes PfID Annotation EC Transcript
General Transcription Factors Polymerase core subunit MAL13P1.213 transcription activator
Image left : 32px, top : 4px
PF07_0027 DNA-directed RNA polymerase II 8.2 kDa polypeptide 2.7.7.6
Image left : 32px, top : 4px
PF13_0341 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative 2.7.7.6
Image left : 32px, top : 4px
PFC0155c DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative 2.7.7.6
Image left : 32px, top : 4px
PFL0665c DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative 2.7.7.6
Image left : 32px, top : 4px
PFC0805w DNA-directed RNA polymerase II subunit RPB1 2.7.7.6
Image left : 32px, top : 4px
PF13_0023 DNA-directed RNA polymerase II subunit RPB11, putative 2.7.7.6
Image left : 32px, top : 4px
PFB0715w DNA-directed RNA polymerase II subunit RPB2 2.7.7.6
Image left : 32px, top : 4px
PFI1130c DNA-directed RNA polymerase II subunit RPB3 2.7.7.6
Image left : 32px, top : 4px
PFB0245c DNA-directed RNA polymerase II 16 kDa subunit 2.7.7.6
Image left : 32px, top : 4px
PF10_0269 DNA-directed RNA polymerase II subunit RPB7, putative 2.7.7.6
Image left : 32px, top : 4px
PFA0505c DNA-directed RNA polymerase II subunit RPB9, putative 2.7.7.6
Image left : 32px, top : 4px
Polymerase accessories PF08_0037 RNA polymerase II mediator complex protein MED7
Image left : 32px, top : 4px
PF11_0093 IWS1-like protein, putative
Image left : 32px, top : 4px
PF14_0718 RNA polymerase II-associated factor SOH1
Image left : 32px, top : 4px
General coactivators involved in initiation PF13_0043 CCAAT Box-binding complex
Image left : 32px, top : 4px
PF11_0477
Image left : 8px, top : 12px
Image left : 8px, top : 12px
CCAAT Box-binding complex
Image left : 32px, top : 4px
MAL7P1.78 transcription initiation factor iia subunit 1
PFA0525w
Image left : 8px, top : 12px
transcription initiation factor TFIIB, putative
Image left : 32px, top : 4px
PFE0415w TFIIB
Image left : 32px, top : 4px
PFE0305w
Image left : 8px, top : 12px
transcription initiation factor TFIID, TATA-binding protein
Image left : 32px, top : 4px
PF14_0267 TFIID
Image left : 32px, top : 4px
PFE1110w transcription initiation factor tfiid subunit 10, putative
MAL7P1.86 TFIIE
Image left : 32px, top : 4px
MAL13P1.360 TFIIE
PFC1055w TFIIH core p62/TFB1
Image left : 32px, top : 4px
PF14_0398 TFIIH core TFB5
Image left : 32px, top : 4px
PF13_0279 RNA polymerase II transcription factor B subunit 4, putative
Image left : 32px, top : 4px
MAL13P1.76
Image left : 8px, top : 12px
general transcription factor IIH subunit 2
Image left : 32px, top : 4px
PFL2125c RNA polymerase II transcription factor B subunit 2, putative
Image left : 32px, top : 4px
General coactivators involved in initiation and elongation MAL8P1.104 CCR4-associated factor 1 CAF1
Image left : 32px, top : 4px
PFE0375w cell differentiation protein, putative CAF40
Image left : 32px, top : 4px
PFA0350W carbon catabolite repressor protein 4, putative CCR4
PFC0850c endonuclease/exonuclease/phosphatase family protein, putative
Image left : 32px, top : 4px
PFE0980c carbon catabolite repressor protein 4, putative CCR4
Image left : 32px, top : 4px
PF11_0049 CCR4-NOT transcription complex subunit 1, putative NOT1
Image left : 32px, top : 4px
PF14_0170 NOT family protein, putative
Image left : 32px, top : 4px
PF11_0297 CCR4-NOT transcription complex subunit 2, putative NOT2
Image left : 32px, top : 4px
PF10_0062 CCR4-NOT transcription complex subunit 5, putative NOT5
Image left : 32px, top : 4px
PFL1705w CCR4-NOT transcription complex subunit 4, putative NOT4
PF14_0241 basic transcription factor 3b, putative
Image left : 32px, top : 4px
PF11_0293
Image left : 8px, top : 12px
multiprotein bridging factor type 1, putative MBF1
Image left : 32px, top : 4px
Transcription factors PF10_0293 transcription factor, putative
Image left : 32px, top : 4px
PFF0535c transcription elongation factor spt5, putative
Image left : 32px, top : 4px
PF07_0057 transcription elongation factor s-II, putative
Image left : 32px, top : 4px
PF10_0115 PRE-binding protein
Image left : 32px, top : 4px
Chromatin-related Factors Histones PFC0920w
Image left : 8px, top : 12px
Histone H2A
Image left : 32px, top : 4px
PFF0860c
Image left : 8px, top : 12px
Histone H2A
Image left : 32px, top : 4px
PF07_0054
Image left : 8px, top : 12px
Histone H2B
Image left : 32px, top : 4px
PF11_0062
Image left : 8px, top : 12px
Histone H2B
Image left : 32px, top : 4px
PFF0510w
Image left : 8px, top : 12px
Image left : 8px, top : 12px
histone H3
PFF0865w
Image left : 8px, top : 12px
Image left : 8px, top : 12px
histone H3 variant
Image left : 32px, top : 4px
PF11_0061
Image left : 8px, top : 12px
Histone H4
Image left : 32px, top : 4px
Chromatin structuration PF10_0328
Image left : 8px, top : 12px
bromodomain protein
Image left : 32px, top : 4px
PF14_0724 bromodomain protein
Image left : 32px, top : 4px
PFA0510w bromodomain protein
Image left : 32px, top : 4px
PFL0635c
Image left : 8px, top : 12px
bromodomain protein
Image left : 32px, top : 4px
PF11_0418 chromodomain protein
Image left : 32px, top : 4px
PFL1005c
Image left : 8px, top : 12px
heterochromatin protein 1
Image left : 32px, top : 4px
PFB0875c Chromatin-binding protein, putative
Image left : 32px, top : 4px
PFF1185w
Image left : 8px, top : 12px
SNF2 helicase, putative 3.6.4.12
Image left : 32px, top : 4px
PF10_0232
Image left : 8px, top : 12px
SNF2 helicase, putative 3.6.4.12
Image left : 32px, top : 4px
PFB0730w DEAD/DEAH box helicase, putative 3.6.4.13
Image left : 32px, top : 4px
PF13_0308 DNA helicase, putative 3.6.4.12
Image left : 32px, top : 4px
PF08_0048
Image left : 8px, top : 12px
Snf2-related CBP activator
Image left : 32px, top : 4px
PFF0225w DNA helicase 3.6.4.12
Image left : 32px, top : 4px
MAL8P1.65 DNA helicase, putative 3.6.4.12
Image left : 32px, top : 4px
PF11_0053 chromatin remodeling protein
Image left : 32px, top : 4px
PF14_0314 chromatin assembly factor 1 p55 subunit, putative
Image left : 32px, top : 4px
PFA0520c chromatin assembly factor 1 protein WD40 domain, putative
Image left : 32px, top : 4px
Chromatin remodelling PFE0090w chromosome assembly factor 1, CAF-1
Image left : 32px, top : 4px
PF14_0393
Image left : 8px, top : 12px
FACT complex subunit SSRP1, putative
Image left : 32px, top : 4px
PFE0870w FACT complex subunit SPT16, putative
PF08_0100
Image left : 8px, top : 12px
Image left : 8px, top : 12px
RuvB-like protein 1 3.6.4.12
Image left : 32px, top : 4px
PF11_0071
Image left : 8px, top : 12px
Image left : 8px, top : 12px
RuvB DNA helicase, putative 3.6.4.12
Image left : 32px, top : 4px
PF13_0330
Image left : 8px, top : 12px
RuvB-like helicase 3.6.4.12
Image left : 32px, top : 4px
PF14_0608 YL1 nuclear protein, putative
Image left : 32px, top : 4px
PFI0930c
Image left : 8px, top : 12px
nucleosome assembly protein NAPS
Image left : 32px, top : 4px
PFL0185c
Image left : 8px, top : 12px
nucleosome assembly protein 1 NAPL
Image left : 32px, top : 4px
PFL0145c
Image left : 8px, top : 12px
high mobility group protein B1
Image left : 32px, top : 4px
MAL8P1.72
Image left : 8px, top : 12px
high mobility group protein B2
PFL0290w high mobility group protein B3, putative
Image left : 32px, top : 4px
MAL13P1.290 high mobility group protein B4, putative
Modifying enzymes MAL13P1.255 N6-adenine-specific methylase, putative 2.1.1.62
Image left : 32px, top : 4px
PF11_0192
Image left : 8px, top : 12px
histone acetyltransferase MYST 2.3.1.48
Image left : 32px, top : 4px
PF08_0034
Image left : 8px, top : 12px
histone acetyltransferase GCN5 2.3.1.48
Image left : 32px, top : 4px
MAL8P1.200 acetyltransferase, putative 2.3.1.88
PF10_0036 N-acetyltransferase, putative 2.3.1.88
Image left : 32px, top : 4px
PF13_0131 histone acetyltransferase GCN5 2.3.1.48
Image left : 32px, top : 4px
PF14_0350 N-acetyltransferase, putative 2.3.1.48
Image left : 32px, top : 4px
PFA0465c N-acetyltransferase, putative 2.3.1.1
Image left : 32px, top : 4px
PF14_0690
Image left : 8px, top : 12px
histone deacetylase 3.5.1.98
Image left : 32px, top : 4px
PFI1260c
Image left : 8px, top : 12px
Image left : 8px, top : 12px
histone deacetylase, putative HDAC 3.5.1.98
Image left : 32px, top : 4px
PF13_0152
Image left : 8px, top : 12px
Image left : 8px, top : 12px
transcriptional regulatory protein sir2a  SIR2A 3.5.1.98
Image left : 32px, top : 4px
PF14_0489 transcriptional regulatory protein sir2b SIR2B 3.5.1.-
Image left : 32px, top : 4px
MAL8P1.111 JmjC domain containing protein JmjC1 1.14.11.27
Image left : 32px, top : 4px
MAL13P1.122
Image left : 8px, top : 12px
variant-silencing SET protein SETvs 2.1.1.43
Image left : 32px, top : 4px
PF08_0012
Image left : 8px, top : 12px
SET domain protein SET3 2.1.1.43
Image left : 32px, top : 4px
PF11_0160 SET domain protein SET7 2.1.1.43
Image left : 32px, top : 4px
PFD0190w SET domain protein SET8 2.1.1.43
Image left : 32px, top : 4px
PFF1440w
Image left : 8px, top : 12px
SET domain protein SET1 2.1.1.43
Image left : 32px, top : 4px
PFL0690c
Image left : 8px, top : 12px
SET histone-lysine N-methyltransferase, putative SET5 2.1.1.43
Image left : 32px, top : 4px
MAL7P1.37 histone deacetylase complex subunit sap18, putative
Image left : 32px, top : 4px
MAL8P1.131 YEATS domain-containing protein, putative
Image left : 32px, top : 4px
Specific Trancription Factors Apicomplexan specifc AP2 PF13_0026 AP2 domain transcription factor, putative
PF14_0271 AP2 domain transcription factor AP2-o3, putative
PFF0550w ApiAP2 developmental TF
MAL8P1.153 Ap2 domain transcription factor, putative
Image left : 32px, top : 4px
PF11_0163 AP2 domain transcription factor, putative (Early schizont)
Image left : 32px, top : 4px
PF14_0533 AP2 domain transcription factor, putative
Image left : 32px, top : 4px
PFE0840c AP2 domain transcription factor AP2-O2, putative
Image left : 32px, top : 4px
PFF0200c
Image left : 8px, top : 12px
ApiAP2 developmental TF (Early schizont)
Image left : 32px, top : 4px
PFF0670w AP2 domain transcription factor, putative (Early schizont)
Image left : 32px, top : 4px
PF13_0097 ApiAP2 developmental TF (multiple stages)
Image left : 32px, top : 4px
PFD0200c AP2 domain transcription factor AP2-SP2, putative
Image left : 32px, top : 4px
PF07_0126 AP2 domain transcription factor ap2-l, putative
Image left : 32px, top : 4px
PF14_0079 AP2 domain transcription factor AP2-g2, putative, (Ring)
Image left : 32px, top : 4px
PF14_0633 AP2 domain transcription factor AP2-SP
Image left : 32px, top : 4px
PFF1100c AP2 domain transcription factor AP2-sp3, putative
Image left : 32px, top : 4px
PF11_0091 AP2 domain transcription factor, putative
Image left : 32px, top : 4px
PF11_0404 AP2 domain transcription factor, putative
Image left : 32px, top : 4px
PF11_0442 AP2 domain transcription factor AP2-o, putative
Image left : 32px, top : 4px
PF13_0235 AP2 domain transcription factor, putative
Image left : 32px, top : 4px
PFD0985w ApiAP2 developmental TF (schizont)
Image left : 32px, top : 4px
PFL1085w AP2 domain transcription factor AP-g
PF10_0075 AP2 domain transcription factor, putative
Image left : 32px, top : 4px
PF13_0267 AP2 domain transcription factor AP2-o4, putative (Trophozoite)
Image left : 32px, top : 4px
PF14_0471 AP2 domain transcription factor, putative
Image left : 32px, top : 4px
PFI1665w AP2 domain transcription factor, putative
Image left : 32px, top : 4px
PFL1075w AP2 domain transcription factor
Image left : 32px, top : 4px
PFL1900w ApiAP2 developmental TF (Trophozoite)
Image left : 32px, top : 4px
Zinc finger MAL13P1.37 tripartite motif protein, putative
PFE0895c zinc finger protein, putative
Image left : 32px, top : 4px
PFF0105w MYND finger protein, putative
Image left : 32px, top : 4px
PFF0350w MYND finger protein, putative
Image left : 32px, top : 4px
PF10_0091 zinc finger protein, putative
Image left : 32px, top : 4px
PF14_0479 zinc finger protein, putative
Image left : 32px, top : 4px
PF14_0612 zinc finger protein, putative
Image left : 32px, top : 4px
PFC0690c zinc finger protein, putative
Image left : 32px, top : 4px
PFD0485w zinc finger protein, putative