Transcription related proteins encoding genes
Adapted from Bischoff E, Vaquero C. In silico and biological survey of transcription-associated proteins implicated in the transcriptional machinery during the erythrocytic development of Plasmodium falciparum. BMC Genomics. 2010 11:34.PMID: 20078850
Classes Sub-classes PfID Annotation EC# Transcript
General Transcription Factors Polymerase core subunit PF3D7_1342700 DNA-directed RNA polymerases I, II, and III subunit RPABC4, putative
PF3D7_0708100 DNA-directed RNA polymerases I, II, and III subunit RPABC5, putative 2.7.7.6
PF3D7_1364800 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative 2.7.7.6
PF3D7_0303300 DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative 2.7.7.6
PF3D7_1213700 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative 2.7.7.6
PF3D7_0318200 DNA-directed RNA polymerase II subunit RPB1 2.7.7.6
PF3D7_1304900 DNA-directed RNA polymerase II subunit RPB11, putative 2.7.7.6
PF3D7_0215700 DNA-directed RNA polymerase II subunit RPB2 2.7.7.6
PF3D7_0923000 DNA-directed RNA polymerase II subunit RPB3 2.7.7.6
PF3D7_0205500 DNA-directed RNA polymerase II 16 kDa subunit, putative 2.7.7.6
PF3D7_1027400 DNA-directed RNA polymerase II subunit RPB7, putative 2.7.7.6
PF3D7_0110400 DNA-directed RNA polymerase II subunit RPB9, putative 2.7.7.6
Polymerase accessories PF3D7_0822100 mediator of RNA polymerase II transcription subunit 7, putative
PF3D7_1108000 IWS1-like protein, putative
PF3D7_1475000 mediator of RNA polymerase ii transcription subunit 31, putative
General coactivators involved in initiation PF3D7_1308100 CCAAT-binding transcription factor, putative
PF3D7_1146600
ooocyst rupture protein 1, putative
PF3D7_1439500 oocyst rupture protein 2, putative
PF3D7_0716400 transcription initiation factor IIA subunit 1, putative
PF3D7_0110800
transcription initiation factor TFIIB, putative
PF3D7_0508400 conserved protein, unknown function
PF3D7_0506200
TATA-box-binding protein
PF3D7_1428800 transcription initiation TFIID-like, putative
PF3D7_0522200 transcription initiation factor TFIID subunit 10, putative
PF3D7_0717300 transcription initiation factor IIE subunit alpha, putative
PF3D7_1326700 conserved apicomplexan protein, unknown function
PF3D7_0323600 bsd domain-containing protein, putative
PF3D7_1441900 RNA polymerase II transcription factor B subunit 5, putative 2.7.7.6
PF3D7_1353500 RNA polymerase II transcription factor B subunit 4, putative 2.7.7.6
PF3D7_1314900
general transcription factor IIH subunit 2
PF3D7_1244200 RNA polymerase II transcription factor B subunit 2, putative 2.7.7.6
General coactivators involved in initiation and elongation PF3D7_0811300 CCR4-associated factor 1
PF3D7_0507600 protein caf40, putative
PF3D7_0107200
ccr4 domain-containing protein 3, putative
PF3D7_0319200
ccr4 domain-containing protein 4, putative
PF3D7_0519500 ccr4 domain-containing protein 1, putative
PF3D7_1103800 CCR4-NOT transcription complex subunit not1-g, putative
PF3D7_1417200 CCR4-NOT transcription complex subunit not1, putative
PF3D7_1128600 CCR4-NOT transcription complex subunit 2, putative
PF3D7_1006100 CCR4-NOT transcription complex subunit 5, putative
PF3D7_1235300 CCR4-NOT transcription complex subunit 4, putative
PF3D7_1426100 transcription factor btf3, putative
PF3D7_1128200
multiprotein bridging factor type 1, putative
Transcription factors PF3D7_1030000 transcription elongation factor SPT4, putative
PF3D7_0610900 transcription elongation factor SPT5, putative
PF3D7_0714500 transcription elongation factor s-II, putative
PF3D7_1406100 tubby domain-containing protein, putative
PF3D7_1011800
PRE-binding protein
Chromatin-related Factors   Histones PF3D7_0320900
H2A.Z
PF3D7_0617800
histone H2A
PF3D7_0714000
histone H2B variant
PF3D7_1105100
histone H2B
PF3D7_0610400
histone H3
PF3D7_0617900
histone H3 variant
PF3D7_1105000
histone H4
 Chromatin structuration PF3D7_1033700
bromodomain protein 2
PF3D7_1475600 bromodomain protein 4, putative, bdp4
PF3D7_0110500 bromodomain protein 3, putative; bdp3
PF3D7_1212900
bromodomain protein 2, putative
PF3D7_1140700 chromo domain-containing protein, putative
PF3D7_1220900
heterochromatin protein 1
PF3D7_0218700 pre-mRNA-processing protein 45, putative
PF3D7_0624600
iswi chromatin-remodeling complex atpase 3.6.4.12
PF3D7_1023900
SNF2 helicase, putative chromodomain-helicase-DNA-binding protein 1 homolog, putative 3.6.4.12
PF3D7_0216000 DEAD/DEAH box helicase, putative 3.6.4.13
PF3D7_1357500 DNA helicase, putative 3.6.4.12
PF3D7_0820000
helicase SRCAP, putative Snf2-related CBP activator, putative
PF3D7_0604600 DNA helicase, putative 3.6.4.12
PF3D7_0818700 DNA helicase, putative 3.6.4.12
PF3D7_1104200
chromatin remodeling protein
PF3D7_1433300
histone-binding protein rbbp7, putative,
PF3D7_0110700
chromatin assembly factor 1 subunit c, putative; caf1c; rbap48
Chromatin remodelling PF3D7_0501800
chromatin assembly factor 1 subunit a CAF1A
PF3D7_1441400
FACT complex subunit SSRP1, putative
PF3D7_0517400 FACT complex subunit SPT16, putative
PF3D7_0809700
RuvB-like helicase 1 3.6.4.12
PF3D7_1106000
RuvB-like helicase 2 3.6.4.12
PF3D7_1362200
RuvB-like helicase 3 3.6.4.12
PF3D7_1464000 YL1 nuclear protein, putative
PF3D7_0919000
nucleosome assembly protein
PF3D7_1203700
nucleosome assembly protein
PF3D7_1202900
high mobility group protein B1
PF3D7_0817900
high mobility group protein B2
PF3D7_1205800 high mobility group protein B3, putative
PF3D7_1359200 high mobility group protein B4, putative
Modifying enzymes PF3D7_1350700 N6-adenine-specific methylase, putative 2.1.1.62
PF3D7_1118600
histone acetyltransferase
PF3D7_0823300
histone acetyltransferase GCN5 2.3.1.48
PF3D7_0805400 acetyltransferase, putative 2.3.1.1
PF3D7_1003300 N-terminal acetyltransferase A complex catalytic subunit ARD1, putative 2.3.1.88
PF3D7_1323300 acetyltransferase, GNAT family, putative 2.3.1.1
PF3D7_1437000
N-acetyltransferase, putative 2.3.1.1
PF3D7_0109500 N-acetyltransferase, putative 2.3.1.1
PF3D7_1472200
histone deacetylase, putative 3.5.1.98
PF3D7_0925700
histone deacetylase 1 3.5.1.98
PF3D7_1328800
transcriptional regulatory protein sir2a 3.5.1.98
PF3D7_1451400
transcriptional regulatory protein sir2b 3.5.1.98
PF3D7_0809900 jmjc domain-containing protein 1, putative 1.14.11.27
PF3D7_1322100
set domain-containing protein 2 2.1.1.43
PF3D7_0827800
SET domain protein, putative 2.1.1.43
PF3D7_1115200
histone-lysine n-methyltransferase set7 2.1.1.43
PF3D7_0403900 SET domain protein, putative 2.1.1.43
PF3D7_0629700
SET domain protein, putative 2.1.1.43
PF3D7_1214200
histone-lysine n-methyltransferase SET5 2.1.1.43
PF3D7_0711400 histone deacetylase complex subunit SAP18, putative
PF3D7_0807000 YEATS domain-containing protein, putative
Specific Trancription Factors Apicomplexan specifc AP2 PF3D7_1305200
AP2 domain transcription factor, putative
PF3D7_1429200
AP2 domain transcription factor AP2-O3, putative
PF3D7_0611200
ap2 domain transcription factor ap2-exp2
PF3D7_0802100 ap2 domain transcription factor ap2-lt
PF3D7_1115500
AP2 domain transcription factor, putative
PF3D7_1456000
AP2 domain transcription factorAP2-HC
PF3D7_0516800 AP2 domain transcription factor AP2-O2, putative
PF3D7_0604100
SPE2-interacting protein transcription factor with AP2 domain(s)
PF3D7_0613800
AP2 domain transcription factor, putative
PF3D7_1317200 AP2 domain transcription factor AP2-FG
PF3D7_0404100
AP2 domain transcription factor AP2-SP2, putative
PF3D7_0730300
AP2 domain transcription factor AP2-L, putative
PF3D7_1408200
AP2 domain transcription factor AP2-G2
PF3D7_1466400
AP2 domain transcription factor AP2-SP/EXP
PF3D7_0622900
AP2 domain transcription factor AP2Tel
PF3D7_1107800
AP2 domain transcription factor, putative
PF3D7_1139300 ap2 domain transcription factor ap2-g5, putative
PF3D7_1143100
AP2 domain transcription factor AP2-O
PF3D7_1342900 ap2 domain transcription factor ap2-hs
PF3D7_0420300
AP2 domain transcription factor
PF3D7_1222600
AP2 domain transcription factor AP-G
PF3D7_1007700
AP2 domain transcription transcription factor AP2-I
PF3D7_1350900
AP2 domain transcription factor AP2-O4, putative
PF3D7_1449500
AP2 domain transcription factor, putative, AP2-O5
PF3D7_0934400
AP2 domain transcription factor, putative
PF3D7_1222400
AP2 domain transcription factor
PF3D7_1239200
transcription factor with AP2 domain(s)
Zinc finger PF3D7_1307900 tripartite motif protein, putative
PF3D7_0517900 zinc finger protein, putative
PF3D7_0602200 MYND-type zinc finger protein, putative
PF3D7_0607100 MYND finger protein, putative
PF3D7_1009400 zinc finger protein, putative
PF3D7_1450400 E3 ubiquitin-protein ligase znf598, putative
PF3D7_1464400 zinc finger protein, putative
PF3D7_0315800 zinc finger protein, putative, HAKAI
PF3D7_0409800 zinc finger protein, putative
PF3D7_1209300
telomere repeat-binding zinc finger protein, putative
PF3D7_1243100 zinc finger protein, putative
PF3D7_0909700 FHA domain protein, putative
PF3D7_1205500 zinc finger protein, putative
PF3D7_0818100
zinc finger protein, putative
PF3D7_1008600 zinc finger (ccch type) protein, putative
PF3D7_1019300 zinc finger protein, putative
PF3D7_1134600 zinc finger protein, putative
PF3D7_1358600 zinc finger protein, putative
PF3D7_1425600 zinc finger protein, putative
PF3D7_1443800
pre-mrna-splicing factor cwc24
PF3D7_1464200 zinc finger ccch domain-containing protein, putative
PF3D7_1468400
zinc finger protein, putative
PF3D7_0522900 zinc finger protein, putative
PF3D7_0525000 zinc finger protein, putative
PF3D7_0906600 zinc finger protein, putative
PF3D7_0927200 zinc finger protein, putative
PF3D7_1210200 zinc finger protein, putative
PF3D7_1119300 splicing factor U2AF small subunit, putative
Helix Turn Helix PF3D7_1014600 transcriptional coactivator ADA2
PF3D7_1205800 high mobility group protein B3, putative
PF3D7_1315800 transcription factor MYB1
PF3D7_1033600 pre-mRNA-splicing factor cef1, putative
PF3D7_1216900 DNA-binding chaperone, putative
PF3D7_1309800 homeobox-like domain-containing protein, putative
KH domain PF3D7_1011800
PRE-binding protein
PF3D7_0109600
cold-shock protein, putative
TAP partners PF3D7_0802800
serine/threonine protein phosphatase 2B catalytic subunit A 3.1.3.16
PF3D7_1451700
calcineurin subunit B
PF3D7_0423200 BSD-domain protein, putative
PF3D7_0914900 BSD-domain protein, putative
PF3D7_0925600 zinc binding protein (Yippee), putative
PF3D7_1008100 phd finger protein phd1
PF3D7_1141800
EELM2 domain-containing protein, putative
PF3D7_1361500 ph domain-containing protein, putative
PF3D7_1221000
histone-lysine N-methyltransferase, H3 lysine-4 specific 2.1.1.43
PF3D7_0615700 tho complex subunit 4, putative
Online articles related to Transcription related proteins encoding genes retrieved from PubMed