Transcriptomic response of dihydroartemisinin (DHA) treated K1 strain trophozoites
Shaw PJ, Chaotheing S, Kaewprommal P, Piriyapongsa J, Wongsombat C, Suwannakitti N, Koonyosying P, Uthaipibull C, Yuthavong Y, Kamchonwongpaisan S. Plasmodium parasites mount an arrest response to dihydroartemisinin, as revealed by whole transcriptome shotgun sequencing (RNA-seq) and microarray study. BMC Genomics. 2015 Oct 21;16(1):830.  PMID: 26490244
Only outliers are shown
PfID Annotation Fold change EC Transcript
PF3D7_1201100 RESA-like protein with PHIST and DnaJ domains; MEC domain-containing protein 44.40
PF3D7_1226100 haloacid dehalogenase-like hydrolase, putative 33.17 3.1.3.1
PF3D7_0927200 zinc finger protein, putative 30.74
PF3D7_1401500
esterase, putative 29.13 3.1.1.5
PF3D7_1473700
nucleoporin NUP116/NSP116, putative 28.17
PF3D7_0202200
EMP1-trafficking protein 27.93
PF3D7_0102600
serine/threonine protein kinase, FIKK family 27.27 2.7.11.1
PF3D7_0114000 exported protein family 1; MEC domain-containing protein 25.48
PF3D7_0401800
Plasmodium exported protein (PHISTb), unknown function 22.26
PF3D7_0830500 tryptophan/threonine-rich antigen sporozoite and liver stage tryptophan-rich protein, putative 22.12
PF3D7_0220300 Plasmodium exported protein, unknown function 21.14
PF3D7_1221400 inner membrane complex protein 1h, putative 20.06
PF3D7_0215300
acyl-CoA synthetase 19.99 6.2.1.3
PF3D7_0424300 erythrocyte binding antigen-165, pseudogene 18.98
PF3D7_1350900
AP2 domain transcription factor AP2-O4, putative 18.76
PF3D7_0424500
serine/threonine protein kinase, FIKK family 18.69 2.7.11.1
PF3D7_0502400
ring-stage membrane protein 1 merozoite surface protein 8 17.10
PF3D7_0220500 Plasmodium exported protein (hyp2), unknown function 16.63
PF3D7_0731200 Plasmodium exported protein, unknown function 16.32
PF3D7_0424700
serine/threonine protein kinase, FIKK family 15.13 2.7.11.1
PF3D7_0919200 PPPDE peptidase, putative 15.10
PF3D7_0902300
serine/threonine protein kinase, FIKK family 14.99 2.7.11.1
PF3D7_1016700 Plasmodium exported protein (PHISTc), unknown function 14.95
PF3D7_0702200
lysophospholipase lpl20 14.84 3.1.1.5
PF3D7_0702100 Plasmodium exported protein (PHISTb), unknown function, pseudogene 14.61
PF3D7_1149300
serine/threonine protein kinase, FIKK family 14.52 2.7.11.1
PF3D7_1455300 conserved Plasmodium protein, unknown function 14.24
PF3D7_0301800 Plasmodium exported protein, unknown function 14.05
PF3D7_0730900
EMP1-trafficking protein 13.95
PF3D7_0726200
serine/threonine protein kinase, FIKK family 13.69 2.7.11.1
PF3D7_1200700 acyl-CoA synthetase 13.03 6.2.1.3
PF3D7_0532600 Plasmodium exported protein, unknown function 13.00
PF3D7_0114400 erythrocyte membrane protein 1 (PfEMP1), exon 2, pseudogene 12.96
PF3D7_1474000 probable protein, unknown function 12.57
PF3D7_0805100 conserved Plasmodium protein, unknown function 12.31
PF3D7_0902600 serine/threonine protein kinase, FIKK family 12.09 2.7.11.1
PF3D7_1401300
proline aminopeptidase 12.08 3.4.11.5
PF3D7_1038800 RESA-like protein with PHIST and DnaJ domains? MEC domain-containing protein 11.74
PF3D7_0214300 conserved Plasmodium protein, unknown function 11.51
PF3D7_0629300 phospholipase, putative phosphatidylcholine-sterol acyltransferase, putative 10.88 2.3.1.43
PF3D7_1370300
membrane associated histidine-rich protein 10.73
PF3D7_1353100
Plasmodium exported protein, unknown function 10.66
PF3D7_0918700 conserved Plasmodium protein, unknown function 10.36
PF3D7_0730800 Plasmodium exported protein, unknown function 10.04
PF3D7_1148900 Plasmodium exported protein, unknown function 9.96
PF3D7_0513300
purine nucleoside phosphorylase 0.34 2.4.2.1
PF3D7_1372600 PIR protein rifin 0.33
PF3D7_1313200
methionyl-tRNA formyltransferase, putative 0.33 2.1.2.9
PF3D7_1113300 UDP-galactose transporter, putative, UGT 0.33
PF3D7_0514500 conserved Plasmodium membrane protein, unknown function 0.33
PF3D7_0104600 conserved Plasmodium protein, unknown function 0.33
PF3D7_1010000 ribosomal protein L43, mitochondrial, putative 0.33
PF3D7_1027600
meiotic recombination protein spo11-2, putative 0.32
PF3D7_0322700 conserved Plasmodium protein, unknown function 0.32
PF3D7_1229700 mitochondrial respiratory chain complex ii subunit, putative 0.32
PF3D7_1032600 conserved protein, unknown function 0.32
PF3D7_0931900
adenylate kinase-like protein 2 0.32 2.7.4.3
PF3D7_0604600 DNA helicase, putative 0.32 3.6.4.12
PF3D7_0321500 peptidase, putative 0.32 3.4.21.26
PF3D7_1032200 conserved Plasmodium protein, unknown function 0.31
PF3D7_0627500
protein DJ-1 0.31
PF3D7_0605100 KH domain-containing protein, putative 0.31
PF3D7_0718700 conserved Plasmodium membrane protein, unknown function 0.31
PF3D7_0714400
calmodulin, putative 0.30
PF3D7_1446200
M17 leucyl aminopeptidase 0.30 3.4.11.1
PF3D7_0521100 conserved Plasmodium protein, unknown function 0.30
PF3D7_1001300
Plasmodium exported protein (PHISTa), unknown function 0.30
PF3D7_1030300 conserved Plasmodium protein, unknown function 0.30
PF3D7_1415500 conserved Plasmodium membrane protein, unknown function 0.29
PF3D7_0806600 kinesin-like protein, putative 0.28
PF3D7_0303600
plasmoredoxin 0.27
PF3D7_1117000 mfs domain-containing protein p115, putative 0.26
PF3D7_1135600 condensin-2 complex subunit d3, putative 0.26
PF3D7_0203800 conserved Plasmodium protein, unknown function 0.26
PF3D7_1439100 DEAD/DEAH box helicase, putative 0.25 3.6.4.13
PF3D7_0924900
alpha-tubulin N-acetyltransferase, putative 0.24 2.3.1.108
PF3D7_1121200 conserved Plasmodium protein, unknown function 0.24
PF3D7_1039200 Plasmodium exported protein, unknown function, pseudogene 0.24
PF3D7_1465800
dynein beta chain, putative 0.20
PF3D7_0622000 conserved Plasmodium protein, unknown function 0.17
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