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Transcripts translationally regulated in asexual blood stages |
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Vembar SS, Macpherson CR, Sismeiro O, Coppée JY, Scherf A. The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages. Genome Biol. 2015 16:212. PMID: 26415947 |
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Caro et al 2014; Elife 10;3. 2014 PMID: 25493618 |
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Foth et al 2011; Mol Cell Proteomics. 2011 10(8):M110.006411. PMID: 21558492 |
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Functionl group |
PfID |
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Annotation |
EC# |
Paper |
Transcript |
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24907 |
DNA metabolism |
PF3D7_0814200 |
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DNA/RNA-binding protein Alba 1 |
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Foth et al |
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24947 |
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PF3D7_1010200 |
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DNA2/NAM7 helicase, putative |
3.6.4.12 |
Caro et al |
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24984 |
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PF3D7_1125300 |
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DNA-directed RNA polymerase |
2.7.7.6 |
Caro et al |
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25015 |
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PF3D7_1226600 |
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proliferating cell nuclear antigen 2 |
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Caro et al |
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25048 |
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PF3D7_1346300 |
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DNA/RNA-binding protein Alba 2 |
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Foth et al |
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25049 |
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PF3D7_1347500 |
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DNA/RNA-binding protein Alba 4 |
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Foth et al |
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25060 |
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PF3D7_1361900 |
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proliferating cell nuclear antigen 1 |
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BOTH |
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25085 |
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PF3D7_1444500 |
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eukaryotic initiation factor 2alpha kinase 1 |
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Caro et al |
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25087 |
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PF3D7_1450300 |
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NADPH--cytochrome P450 reductase, putative |
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Caro et al |
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25094 |
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PF3D7_1467500 |
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DNA/RNA-binding protein KIN17, putative |
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Caro et al |
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25095 |
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PF3D7_1468700 |
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eukaryotic initiation factor 4A helicase 45 |
3.6.4.12 |
Foth et al |
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24828 |
RNA metabolism |
PF3D7_0209800 |
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ATP-dependent RNA helicase UAP56 |
3.6.4.13 |
Foth et al |
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24869 |
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PF3D7_0516300 |
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tRNA pseudouridine synthase, putative |
4.2.1.70 |
Caro et al |
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24875 |
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PF3D7_0604800 |
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RAP protein, putative |
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Caro et al |
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41672 |
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PF3D7_1471300 |
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ckk domain-containing protein, putative |
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24879 |
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PF3D7_0610100 |
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pre-mRNA-splicing factor SLU7, putative |
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Caro et al |
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24882 |
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PF3D7_0612600 |
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cytoplasmic tRNA 2-thiolation protein 1, putative |
2.7.7.72 |
Caro et al |
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24887 |
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PF3D7_0619400 |
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cell division cycle protein 48 homologue, putative |
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Caro et al |
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24897 |
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PF3D7_0717400 |
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queuine tRNA-ribosyltransferase, putative |
2.4.2.29 |
Caro et al |
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24904 |
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PF3D7_0804000 |
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cactin homolog, putative |
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Caro et al |
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24919 |
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PF3D7_0828200 |
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leucine--tRNA ligase, putative |
6.1.1.4 |
Caro et al |
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24955 |
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PF3D7_1019800 |
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tRNA methyltransferase, putative |
2.1.1.61 |
Caro et al |
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24957 |
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PF3D7_1024600 |
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RAP protein, putative |
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Caro et al |
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24981 |
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PF3D7_1123600 |
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RAP protein, putative |
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Caro et al |
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24982 |
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PF3D7_1123900 |
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13 kda ribonucleoprotein-associated protein, putative |
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Foth et al |
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24986 |
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PF3D7_1126300 |
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DnaJ protein, putative |
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Caro et al |
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24996 |
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PF3D7_1143200 |
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DnaJ protein, putative |
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Caro et al |
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25007 |
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PF3D7_1205200 |
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morn1-associated had phosphatase, putative |
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Caro et al |
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25008 |
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PF3D7_1206600 |
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DNA-directed RNA polymerase III subunit RPC2, putative |
2.7.7.6 |
Caro et al |
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25020 |
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PF3D7_1242200 |
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queuine tRNA-ribosyltransferase, putative |
2.4.2.29 |
Caro et al |
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25032 |
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PF3D7_1310700 |
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PhIL1-interacting protein PhIP |
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Caro et al |
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25045 |
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PF3D7_1343200 |
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tRNA guanosine-2'-O-methyltransferase, putative |
2.1.1.34 |
Caro et al |
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25090 |
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PF3D7_1453600 |
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RAP protein, putative |
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Caro et al |
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24853 |
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PF3D7_0418700 |
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RNA-binding protein NOB1, putative |
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Caro et al |
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24845 |
Histone modification |
PF3D7_0403900 |
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SET domain protein, putative |
2.1.1.43 |
Caro et al |
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24850 |
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PF3D7_0407900 |
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AAA family ATPase, putative |
3.6.4.3 |
Caro et al |
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24926 |
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PF3D7_0904700 |
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bacterial histone-like protein |
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Caro et al |
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25013 |
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PF3D7_1224500 |
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histone chaperone ASF1 |
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Caro et al |
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25005 |
Chromosome structure |
PF3D7_1203700 |
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nucleosome assembly protein |
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Foth et al |
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25062 |
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PF3D7_1367000 |
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suppressor of kinetochore protein 1, putative |
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BOTH |
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25072 |
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PF3D7_1416100 |
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protein SEY1, putative |
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Caro et al |
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24829 |
Translation |
PF3D7_0219200 |
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40S ribosomal protein S30 |
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Caro et al |
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24834 |
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PF3D7_0307100 |
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40S ribosomal protein S12, putative |
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Foth et al |
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25648 |
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PF3D7_0319600 |
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elongation factor 1-delta, putative |
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Foth et al |
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24841 |
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PF3D7_0323000 |
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translation machinery-associated protein 7, putative |
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Caro et al |
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24880 |
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PF3D7_0611700 |
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60S ribosomal protein L39 |
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Caro et al |
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24881 |
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PF3D7_0612100 |
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eukaryotic translation initiation factor 3 subunit L, putative |
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Caro et al |
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24893 |
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PF3D7_0705700 |
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40S ribosomal protein S29, putative |
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Caro et al |
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24896 |
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PF3D7_0716800 |
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eukaryotic translation initiation factor 3 subunit I, putative |
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Foth et al |
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24909 |
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PF3D7_0815600 |
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eukaryotic translation initiation factor 3 subunit G, putative |
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Foth et al |
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24925 |
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PF3D7_0904400 |
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signal peptidase complex subunit 3, putative |
3.4.21.89 |
Caro et al |
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24929 |
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PF3D7_0913200 |
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elongation factor 1-beta |
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Foth et al |
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24933 |
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PF3D7_0918300 |
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eukaryotic translation initiation factor 3 subunit F, putative |
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Caro et al |
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24958 |
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PF3D7_1026800 |
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40S ribosomal protein S2 |
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Foth et al |
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24969 |
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PF3D7_1103100 |
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60S acidic ribosomal protein P1, putative |
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Foth et al |
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24989 |
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PF3D7_1130100 |
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60S ribosomal protein L38 |
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Caro et al |
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24990 |
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PF3D7_1130200 |
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60S ribosomal protein P0 |
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Foth et al |
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24995 |
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PF3D7_1142500 |
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60S ribosomal protein L28 |
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Caro et al |
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24997 |
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PF3D7_1144300 |
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60S ribosomal protein L41 |
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Caro et al |
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25006 |
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PF3D7_1204300 |
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eukaryotic translation initiation factor 5A |
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Foth et al |
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25031 |
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PF3D7_1308300 |
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40S ribosomal protein S27 |
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Caro et al |
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25036 |
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PF3D7_1317800 |
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40S ribosomal protein S19 |
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Foth et al |
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25039 |
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PF3D7_1332800 |
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eukaryotic translation initiation factor 6, putative |
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Foth et al |
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25042 |
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PF3D7_1341200 |
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60S ribosomal protein L18, putative |
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Caro et al |
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25043 |
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PF3D7_1342000 |
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40S ribosomal protein S6 |
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Caro et al |
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25050 |
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PF3D7_1350100 |
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lysine--tRNA ligase |
6.1.1.6 |
Foth et al |
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25055 |
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PF3D7_1357000 |
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elongation factor 1-alpha |
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Foth et al |
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25056 |
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PF3D7_1357200 |
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glutamate--tRNA ligase |
6.1.1.17 |
Foth et al |
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25088 |
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PF3D7_1451100 |
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elongation factor 2 |
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Foth et al |
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25092 |
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PF3D7_1460300 |
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60S ribosomal protein L29, putative |
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Caro et al |
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24820 |
Post-translational modification |
PF3D7_0108000 |
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proteasome subunit beta type-3, putative |
3.4.25.1 |
Foth et al |
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24826 |
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PF3D7_0207600 |
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serine repeat antigen 5 |
3.4.22.- |
BOTH |
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24827 |
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PF3D7_0207700 |
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serine repeat antigen 4 |
3.4.22.- |
Caro et al |
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24830 |
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PF3D7_0220100 |
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DnaJ protein, putative |
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Caro et al |
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24835 |
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PF3D7_0308200 |
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T-complex protein 1 subunit eta |
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Foth et al |
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24837 |
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PF3D7_0317000 |
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proteasome subunit alpha type-3, putative |
3.4.25.1 |
Foth et al |
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|
|
24839 |
|
PF3D7_0320300 |
|
|
T-complex protein 1 subunit epsilon |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24840 |
|
PF3D7_0322000 |
|
 |
peptidyl-prolyl cis-trans isomerase |
5.2.1.8 |
BOTH |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24851 |
|
PF3D7_0413600 |
|
 |
26S protease regulatory subunit 6B, putative; 26S proteasome AAA-ATPase subunit RPT3 |
3.6.4.8 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24858 |
|
PF3D7_0501100 |
 |
|
co-chaperone j domain protein jdp |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24863 |
|
PF3D7_0505800 |
 |
|
small ubiquitin-related modifier |
|
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24877 |
|
PF3D7_0608500 |
|
|
proteasome subunit alpha type-2, putative |
3.4.25.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24888 |
|
PF3D7_0621800 |
|
|
nascent polypeptide-associated complex subunit alpha, putative |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24891 |
|
PF3D7_0627500 |
 |
 |
protein DJ-1 |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24894 |
|
PF3D7_0708400 |
 |
 |
heat shock protein 90 |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24895 |
|
PF3D7_0708800 |
 |
 |
PfHsp70-z |
|
BOTH |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24901 |
|
PF3D7_0726200 |
 |
|
serine/threonine protein kinase, FIKK family |
2.7.11.1 |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24902 |
|
PF3D7_0727400 |
 |
|
proteasome subunit alpha type-5, putative |
3.4.25.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24910 |
|
PF3D7_0816600 |
 |
 |
chaperone protein ClpB1 |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24913 |
|
PF3D7_0818200 |
 |
 |
14-3-3 protein |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24914 |
|
PF3D7_0818900 |
 |
 |
PfHsp70-1 |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24916 |
|
PF3D7_0826700 |
 |
 |
receptor for activated c kinase |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24918 |
|
PF3D7_0827900 |
 |
 |
protein disulfide isomerase |
5.3.4.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24922 |
|
PF3D7_0902000 |
 |
|
serine/threonine protein kinase, FIKK family |
2.7.11.1 |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24931 |
|
PF3D7_0917900 |
 |
 |
PfHsp70-2 |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24934 |
|
PF3D7_0919400 |
|
|
protein disulfide-isomerase pdi-trans |
5.3.4.1 |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24938 |
|
PF3D7_0926000 |
|
|
protein kinase, putative |
2.7.11.1 |
Caro et al |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24941 |
|
PF3D7_0931800 |
|
 |
proteasome subunit beta type-6, putative |
3.4.25.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24943 |
|
PF3D7_0934800 |
 |
 |
cAMP-dependent protein kinase catalytic subunit |
2.7.11.11 |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24948 |
|
PF3D7_1011400 |
 |
 |
proteasome subunit beta type-5 |
3.4.25.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24950 |
|
PF3D7_1015600 |
 |
 |
heat shock protein 60 |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24973 |
|
PF3D7_1115300 |
 |
 |
falcipain 2' cysteine proteinase falcipain 2b |
3.4.22.- |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24974 |
|
PF3D7_1115600 |
 |
 |
peptidyl-prolyl cis-trans isomerase |
5.2.1.8 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24975 |
|
PF3D7_1115700 |
 |
 |
cysteine proteinase falcipain 2a falcipain 2 |
3.4.22.- |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25101 |
|
PF3D7_1116100 |
|
|
serine esterase, putative |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24978 |
|
PF3D7_1118200 |
|
|
heat shock protein 90, putative |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24991 |
|
PF3D7_1132200 |
|
|
T-complex protein 1 subunit alpha |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24993 |
|
PF3D7_1134000 |
 |
 |
PfHsp70-3 |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24994 |
|
PF3D7_1134100 |
 |
|
protein disulfide isomerase, putative |
5.3.4.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25011 |
|
PF3D7_1222300 |
 |
 |
endoplasmin, putative |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25012 |
|
PF3D7_1223100 |
 |
 |
cAMP-dependent protein kinase regulatory subunit |
2.7.11.11 |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25023 |
|
PF3D7_1247400 |
 |
 |
peptidyl-prolyl cis-trans isomerase fkbp |
5.2.1.8 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25024 |
|
PF3D7_1247800 |
 |
 |
dipeptidyl aminopeptidase 2 |
3.4.14.1 |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25027 |
|
PF3D7_1252200 |
|
 |
chitinase |
3.2.1.14 |
Caro et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25033 |
|
PF3D7_1311800 |
 |
 |
M1-family alanyl aminopeptidase |
3.4.11.2 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25046 |
|
PF3D7_1344200 |
|
|
PfHsp70-y |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25053 |
|
PF3D7_1353800 |
|
|
proteasome subunit alpha type-4, putative |
3.4.25.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25054 |
|
PF3D7_1353900 |
|
|
proteasome subunit alpha type-7, putative |
3.4.25.1 |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25057 |
|
PF3D7_1357800 |
|
 |
T-complex protein 1 subunit delta, tcp-1-delta |
|
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25059 |
|
PF3D7_1360800 |
 |
 |
falcilysin |
3.4.24.- |
Foth et al |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
25063 |
|
PF3D7_1403900 |
|
|
serine/threonine protein phosphatase cpped1 |
3.1.3.2 |
BOTH |
 |