Transcripts translationally regulated in asexual blood stages
Vembar SS, Macpherson CR, Sismeiro O, Coppée JY, Scherf A. The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages. Genome Biol. 2015 16:212.  PMID: 26415947
Caro et al 2014; Elife 10;3. 2014 PMID: 25493618
Foth et al 2011; Mol Cell Proteomics. 2011 10(8):M110.006411. PMID: 21558492
Functionl group PfID Annotation EC# Paper Transcript
DNA metabolism PF3D7_0814200
DNA/RNA-binding protein Alba 1 Foth et al
PF3D7_1010200 DNA2/NAM7 helicase, putative 3.6.4.12 Caro et al
PF3D7_1125300
DNA-directed RNA polymerase 2.7.7.6 Caro et al
PF3D7_1226600
proliferating cell nuclear antigen 2 Caro et al
PF3D7_1346300
DNA/RNA-binding protein Alba 2 Foth et al
PF3D7_1347500
DNA/RNA-binding protein Alba 4 Foth et al
PF3D7_1361900
proliferating cell nuclear antigen 1 BOTH
PF3D7_1444500 eukaryotic initiation factor 2alpha kinase 1 Caro et al
PF3D7_1450300
NADPH--cytochrome P450 reductase, putative Caro et al
PF3D7_1467500 DNA/RNA-binding protein KIN17, putative Caro et al
PF3D7_1468700
eukaryotic initiation factor 4A helicase 45 3.6.4.12 Foth et al
RNA metabolism PF3D7_0209800
ATP-dependent RNA helicase UAP56 3.6.4.13 Foth et al
PF3D7_0516300 tRNA pseudouridine synthase, putative 4.2.1.70 Caro et al
PF3D7_0604800 RAP protein, putative Caro et al
PF3D7_1471300 ckk domain-containing protein, putative
PF3D7_0610100 pre-mRNA-splicing factor SLU7, putative Caro et al
PF3D7_0612600 cytoplasmic tRNA 2-thiolation protein 1, putative 2.7.7.72 Caro et al
PF3D7_0619400
cell division cycle protein 48 homologue, putative Caro et al
PF3D7_0717400 queuine tRNA-ribosyltransferase, putative 2.4.2.29 Caro et al
PF3D7_0804000 cactin homolog, putative Caro et al
PF3D7_0828200 leucine--tRNA ligase, putative 6.1.1.4 Caro et al
PF3D7_1019800 tRNA methyltransferase, putative 2.1.1.61 Caro et al
PF3D7_1024600 RAP protein, putative Caro et al
PF3D7_1123600 RAP protein, putative Caro et al
PF3D7_1123900
13 kda ribonucleoprotein-associated protein, putative Foth et al
PF3D7_1126300 DnaJ protein, putative Caro et al
PF3D7_1143200 DnaJ protein, putative Caro et al
PF3D7_1205200 morn1-associated had phosphatase, putative Caro et al
PF3D7_1206600 DNA-directed RNA polymerase III subunit RPC2, putative 2.7.7.6 Caro et al
PF3D7_1242200
queuine tRNA-ribosyltransferase, putative 2.4.2.29 Caro et al
PF3D7_1310700
PhIL1-interacting protein PhIP Caro et al
PF3D7_1343200 tRNA guanosine-2'-O-methyltransferase, putative 2.1.1.34 Caro et al
PF3D7_1453600 RAP protein, putative Caro et al
PF3D7_0418700 RNA-binding protein NOB1, putative Caro et al
Histone modification PF3D7_0403900 SET domain protein, putative 2.1.1.43 Caro et al
PF3D7_0407900
AAA family ATPase, putative 3.6.4.3 Caro et al
PF3D7_0904700
bacterial histone-like protein Caro et al
PF3D7_1224500 histone chaperone ASF1 Caro et al
Chromosome structure PF3D7_1203700
nucleosome assembly protein Foth et al
PF3D7_1367000 suppressor of kinetochore protein 1, putative BOTH
PF3D7_1416100 protein SEY1, putative Caro et al
Translation PF3D7_0219200 40S ribosomal protein S30 Caro et al
PF3D7_0307100 40S ribosomal protein S12, putative Foth et al
PF3D7_0319600 elongation factor 1-delta, putative Foth et al
PF3D7_0323000 translation machinery-associated protein 7, putative Caro et al
PF3D7_0611700 60S ribosomal protein L39 Caro et al
PF3D7_0612100 eukaryotic translation initiation factor 3 subunit L, putative Caro et al
PF3D7_0705700 40S ribosomal protein S29, putative Caro et al
PF3D7_0716800
eukaryotic translation initiation factor 3 subunit I, putative Foth et al
PF3D7_0815600 eukaryotic translation initiation factor 3 subunit G, putative Foth et al
PF3D7_0904400 signal peptidase complex subunit 3, putative 3.4.21.89 Caro et al
PF3D7_0913200 elongation factor 1-beta Foth et al
PF3D7_0918300 eukaryotic translation initiation factor 3 subunit F, putative Caro et al
PF3D7_1026800
40S ribosomal protein S2 Foth et al
PF3D7_1103100
60S acidic ribosomal protein P1, putative Foth et al
PF3D7_1130100 60S ribosomal protein L38 Caro et al
PF3D7_1130200
60S ribosomal protein P0 Foth et al
PF3D7_1142500 60S ribosomal protein L28 Caro et al
PF3D7_1144300 60S ribosomal protein L41 Caro et al
PF3D7_1204300
eukaryotic translation initiation factor 5A Foth et al
PF3D7_1308300 40S ribosomal protein S27 Caro et al
PF3D7_1317800 40S ribosomal protein S19 Foth et al
PF3D7_1332800 eukaryotic translation initiation factor 6, putative Foth et al
PF3D7_1341200 60S ribosomal protein L18, putative Caro et al
PF3D7_1342000 40S ribosomal protein S6 Caro et al
PF3D7_1350100
lysine--tRNA ligase 6.1.1.6 Foth et al
PF3D7_1357000
elongation factor 1-alpha Foth et al
PF3D7_1357200
glutamate--tRNA ligase 6.1.1.17 Foth et al
PF3D7_1451100
elongation factor 2 Foth et al
PF3D7_1460300 60S ribosomal protein L29, putative Caro et al
Post-translational modification PF3D7_0108000
proteasome subunit beta type-3, putative 3.4.25.1 Foth et al
PF3D7_0207600
serine repeat antigen 5 3.4.22.- BOTH
PF3D7_0207700
serine repeat antigen 4 3.4.22.- Caro et al
PF3D7_0220100 DnaJ protein, putative Caro et al
PF3D7_0308200 T-complex protein 1 subunit eta Foth et al
PF3D7_0317000 proteasome subunit alpha type-3, putative 3.4.25.1 Foth et al
PF3D7_0320300 T-complex protein 1 subunit epsilon Foth et al
PF3D7_0322000
peptidyl-prolyl cis-trans isomerase 5.2.1.8 BOTH
PF3D7_0413600
26S protease regulatory subunit 6B, putative; 26S proteasome AAA-ATPase subunit RPT3 3.6.4.8 Foth et al
PF3D7_0501100
co-chaperone j domain protein jdp Foth et al
PF3D7_0505800
small ubiquitin-related modifier Caro et al
PF3D7_0608500 proteasome subunit alpha type-2, putative 3.4.25.1 Foth et al
PF3D7_0621800 nascent polypeptide-associated complex subunit alpha, putative Foth et al
PF3D7_0627500
protein DJ-1 Foth et al
PF3D7_0708400
heat shock protein 90 Foth et al
PF3D7_0708800
PfHsp70-z BOTH
PF3D7_0726200
serine/threonine protein kinase, FIKK family 2.7.11.1 Caro et al
PF3D7_0727400
proteasome subunit alpha type-5, putative 3.4.25.1 Foth et al
PF3D7_0816600
chaperone protein ClpB1 Foth et al
PF3D7_0818200
14-3-3 protein Foth et al
PF3D7_0818900
PfHsp70-1 Foth et al
PF3D7_0826700
receptor for activated c kinase Foth et al
PF3D7_0827900
protein disulfide isomerase 5.3.4.1 Foth et al
PF3D7_0902000
serine/threonine protein kinase, FIKK family 2.7.11.1 Caro et al
PF3D7_0917900
PfHsp70-2 Foth et al
PF3D7_0919400 protein disulfide-isomerase pdi-trans 5.3.4.1 Caro et al
PF3D7_0926000 protein kinase, putative 2.7.11.1 Caro et al
PF3D7_0931800
proteasome subunit beta type-6, putative 3.4.25.1 Foth et al
PF3D7_0934800
cAMP-dependent protein kinase catalytic subunit 2.7.11.11 Caro et al
PF3D7_1011400
proteasome subunit beta type-5 3.4.25.1 Foth et al
PF3D7_1015600
heat shock protein 60 Foth et al
PF3D7_1115300
falcipain 2' cysteine proteinase falcipain 2b 3.4.22.- Caro et al
PF3D7_1115600
peptidyl-prolyl cis-trans isomerase 5.2.1.8 Foth et al
PF3D7_1115700
cysteine proteinase falcipain 2a falcipain 2 3.4.22.- Foth et al
PF3D7_1116100 serine esterase, putative Foth et al
PF3D7_1118200 heat shock protein 90, putative Foth et al
PF3D7_1132200 T-complex protein 1 subunit alpha Foth et al
PF3D7_1134000
PfHsp70-3 Foth et al
PF3D7_1134100
protein disulfide isomerase, putative 5.3.4.1 Foth et al
PF3D7_1222300
endoplasmin, putative Foth et al
PF3D7_1223100
cAMP-dependent protein kinase regulatory subunit 2.7.11.11 Caro et al
PF3D7_1247400
peptidyl-prolyl cis-trans isomerase fkbp 5.2.1.8 Foth et al
PF3D7_1247800
dipeptidyl aminopeptidase 2 3.4.14.1 Caro et al
PF3D7_1252200
chitinase 3.2.1.14 Caro et al
PF3D7_1311800
M1-family alanyl aminopeptidase 3.4.11.2 Foth et al
PF3D7_1344200
PfHsp70-y Foth et al
PF3D7_1353800 proteasome subunit alpha type-4, putative 3.4.25.1 Foth et al
PF3D7_1353900 proteasome subunit alpha type-7, putative 3.4.25.1 Foth et al
PF3D7_1357800
T-complex protein 1 subunit delta, tcp-1-delta Foth et al
PF3D7_1360800
falcilysin 3.4.24.- Foth et al
PF3D7_1403900 serine/threonine protein phosphatase cpped1 3.1.3.2 BOTH
PF3D7_1407800
plasmepsin IV 3.4.23.- Foth et al
PF3D7_1407900
plasmepsin I 3.4.23.38 Foth et al
PF3D7_1408000
plasmepsin II 3.4.23.39
PF3D7_1408100
plasmepsin III histo-aspartic protease 3.4.23.- Foth et al
PF3D7_1428300 proliferation-associated protein 2g4, putative Foth et al
PF3D7_1434300
Hsp70/Hsp90 organizing protein Foth et al
PF3D7_1437900
HSP40, subfamily A Foth et al
PF3D7_1472400
M1-family alanyl aminopeptidase, putative 3.4.11.2 Caro et al
PF3D7_1474800 proteasome subunit alpha type-1, putative 3.4.25.1 Foth et al
PF3D7_1476400 serine/threonine protein kinase, FIKK family, pseudogene 2.7.11.1 Caro et al
Amino acid metabolism PF3D7_0608800
ornithine aminotransferase 2.6.1.13 BOTH
PF3D7_0922200
S-adenosylmethionine synthetase 2.5.1.6 Foth et al
PF3D7_1236700 S-adenosyl-methyltransferase, putative 2.1.1.12 Caro et al
PF3D7_1357900 pyrroline-5-carboxylate reductase, putative 1.5.1.2 BOTH
Carbohydrate metabolism PF3D7_0406400
cytosolic glyoxalase II 3.1.2.6 Caro et al
PF3D7_0624000
hexokinase 2.7.1.1 Foth et al
PF3D7_0626800
pyruvate kinase 2.7.1.40 Foth et al
PF3D7_0922500
phosphoglycerate kinase 2.7.2.3 BOTH
PF3D7_1015900
enolase 4.2.1.11 BOTH
PF3D7_1033400
haloacid dehalogenase-like hydrolase 3.8.1.- Foth et al
PF3D7_1113700
glyoxalase I 4.4.1.5 Caro et al
PF3D7_1120100
phosphoglycerate mutase, putative 5.4.2.11 Foth et al
PF3D7_1324900
L-lactate dehydrogenase 1.1.1.27 BOTH
PF3D7_1439900
triosephosphate isomerase 5.3.1.1 BOTH
PF3D7_1444800
fructose-bisphosphate aldolase 4.1.2.13 Foth et al
PF3D7_1462800
glyceraldehyde-3-phosphate dehydrogenase 1.2.1.12 Foth et al
Lipid metabolism PF3D7_0104200
StAR-related lipid transfer protein Caro et al
PF3D7_0511800
inositol-3-phosphate synthase 5.5.1.4 Foth et al
PF3D7_0511200
stearoyl-CoA desaturase 1.14.19.1 Caro et al
PF3D7_0605900 elongation of fatty acids protein, putative 6.2.1.3 Caro et al
PF3D7_0924000
patatin-like phospholipase, putative 3.1.1.4 Caro et al
PF3D7_1124600
ethanolamine kinase 2.7.1.82 Caro et al
PF3D7_1127600
CRAL/TRIO domain-containing protein, putative Caro et al
PF3D7_1214300 geranylgeranyl transferase type-2 subunit beta, putative 2.5.1.60 Caro et al
PF3D7_1343000
phosphoethanolamine N-methyltransferase 2.1.1.103 BOTH
PF3D7_1444300
1-acyl-sn-glycerol-3-phosphate acyltransferase, putative 2.3.1.51 Caro et al
Nucleotide metabolism PF3D7_0513300
purine nucleoside phosphorylase 2.4.2.1 BOTH
PF3D7_0520500
phosphomethylpyrimidine kinase, putative 2.7.1.49 Caro et al
PF3D7_1012400
hypoxanthine-guanine phosphoribosyltransferase 2.4.2.8 Foth et al
PF3D7_1015800
ribonucleoside-diphosphate reductase small chain, putative 1.17.4.1 Caro et al
PF3D7_1029600
adenosine deaminase 3.5.4.4 Foth et al
PF3D7_1127100
deoxyuridine 5'-triphosphate nucleotidohydrolase dUTP pyrophosphatase 3.6.1.23 Foth et al
PF3D7_1404600
Adenylyl cyclase Aca 4.6.1.1 Foth et al
PF3D7_1405600
ribonucleoside-diphosphate reductase small chain, putative 1.17.4.1 Caro et al
PF3D7_1437200
ribonucleoside-diphosphate reductase large subunit, putative 1.17.4.1 Foth et al
Redox metabolism PF3D7_0306300
glutaredoxin 1 1.8.4.2 Caro et al
PF3D7_0802200
1-cys peroxiredoxin 1.11.1.15 Caro et al
PF3D7_0814900
superoxide dismutase [Fe] 1.15.1.1 Caro et al
PF3D7_1027300
peroxiredoxin merozoite capping protein 1 1.11.1.15 BOTH
PF3D7_1212000
glutathione peroxidase-like thioredoxin peroxidase 1.11.1.9 Caro et al
PF3D7_1352500 thioredoxin-related protein, putative 5.3.4.1 Caro et al
PF3D7_1419300
glutathione S-transferase 2.5.1.18 Foth et al
PF3D7_1438900
thioredoxin peroxidase 1 1.11.1.15 Foth et al
Cofactor biosynthesis PF3D7_1200700 acyl-CoA synthetase 6.2.1.3 Caro et al
Invasion and motility PF3D7_0206800
merozoite surface protein 2 Caro et al
PF3D7_0402300
reticulocyte binding protein homologue 1 normocyte binding protein 1 Caro et al
PF3D7_0404900
6-cysteine protein Caro et al
PF3D7_0423800
RH5-Ripr membrane anchoring protein cysteine-rich protective antigen BOTH
PF3D7_0501500
rhoptry-associated protein 3 BOTH
PF3D7_0501600
rhoptry-associated protein 2 BOTH
PF3D7_0503400
actin-depolymerizing factor 1 Caro et al
PF3D7_0508000
6-cysteine protein Caro et al
PF3D7_0525800
inner membrane complex protein 1g, putative Caro et al
PF3D7_0612700
6-cysteine protein p12 Caro et al
PF3D7_0613900 myosin E, putative Caro et al
PF3D7_0718500 prefoldin subunit 3, putative Foth et al
PF3D7_0722200
rhoptry-associated leucine zipper-like protein 1 Caro et al
PF3D7_0806600 kinesin-like protein, putative Caro et al
PF3D7_0817700
rhoptry neck protein 5 Caro et al
PF3D7_0819200 perforin-like protein 5 Caro et al
PF3D7_0828800
GPI-anchored micronemal antigen Caro et al
PF3D7_0903700
alpha tubulin 1 Foth et al
PF3D7_0905400
high molecular weight rhoptry protein 3 BOTH
PF3D7_0929400
high molecular weight rhoptry protein 2 BOTH
PF3D7_0930300
merozoite surface protein 1 BOTH
PF3D7_0932200
profilin Foth et al
PF3D7_1003600
inner membrane complex protein 1c, putative Caro et al
PF3D7_1008700
tubulin beta chain BOTH
PF3D7_1017100
rhoptry neck protein 12 Caro et al
PF3D7_1035300
glutamate-rich protein GLURP Caro et al
PF3D7_1035400
merozoite surface protein 3 Caro et al
PF3D7_1035500
merozoite surface protein 6 Caro et al
PF3D7_1035700
duffy binding-like merozoite surface protein Caro et al
PF3D7_1036000
merozoite surface protein 11 Caro et al
PF3D7_1037500
dynamin-like protein Caro et al
PF3D7_1110700 actin-like protein, putative Foth et al
PF3D7_1116000
rhoptry neck protein 4 BOTH
PF3D7_1145100 coatomer subunit gamma, putative Caro et al
PF3D7_1145400
dynamin-like protein Caro et al
PF3D7_1228600
merozoite surface protein 9 Caro et al
PF3D7_1246200
actin I Foth et al
PF3D7_1251200
coronin Caro et al
PF3D7_1252100
rhoptry neck protein 3 Caro et al
PF3D7_1252400
reticulocyte binding protein homologue 3, pseudogene Caro et al
PF3D7_1323700
glideosome associated protein with multiple membrane spans 1 Caro et al
PF3D7_1334800
MSP7-like protein Caro et al
PF3D7_1335100
merozoite surface protein 7 BOTH
PF3D7_1345600
inner membrane complex protein Caro et al
PF3D7_1351700
inner membrane complex protein 1f, putative Caro et al
PF3D7_1364100
6-cysteine protein p92 Caro et al
PF3D7_1406800
glideosome associated protein with multiple membrane spans 3 Caro et al
PF3D7_1410400
rhoptry-associated protein 1 BOTH
PF3D7_1452000
rhoptry neck protein 2 Caro et al
PF3D7_0102500
erythrocyte binding antigen-181 Caro et al
PF3D7_0302500
cytoadherence linked asexual protein 3.1 Foth et al
PF3D7_0935800
cytoadherence linked asexual protein 9 Caro et al
Intracellular trafic PF3D7_0303000
N-ethylmaleimide-sensitive fusion protein 3.6.4.6 Caro et al
PF3D7_0418200 eukaryotic translation initiation factor 3 subunit m, putative Caro et al
PF3D7_0511000
translationally-controlled tumor protein homolog Foth et al
PF3D7_0722400 OBG-like ATPase 1, putative Foth et al
PF3D7_0817100 tRNA modification GTPase, putative Caro et al
PF3D7_0903200
ras-related protein RAB7 3.6.5.2 Caro et al
PF3D7_0911700 GTP-binding protein, putative Caro et al
PF3D7_1108600
endoplasmic reticulum-resident calcium binding protein BOTH
PF3D7_1117700
GTP-binding nuclear protein RAN/TC4 Foth et al
PF3D7_1244600 ADP-ribosylation factor GTPase-activating protein 1, arfgap1 Caro et al
PF3D7_1439800 vesicle-associated membrane protein, putative Caro et al
Protein export PF3D7_0113000
glutamic acid-rich protein Caro et al
PF3D7_0113900
Plasmodium exported protein (hyp8) Caro et al
PF3D7_0202500
early transcribed membrane protein 2 Caro et al
PF3D7_0310400
TVN-junction protein 1 parasite-infected erythrocyte surface protein Caro et al
PF3D7_0401800
Plasmodium exported protein (PHISTb), unknown function Caro et al
PF3D7_0402000
Plasmodium exported protein (PHISTa), unknown function Caro et al
PF3D7_0406200
parasitophorous vacuole membrane protein s16; sexual stage-specific protein s16 Caro et al
PF3D7_0423700
early transcribed membrane protein 4 Caro et al
PF3D7_0500800
erythrocyte membrane protein 2 mature parasite-infected erythrocyte surface antigen Caro et al
PF3D7_0501200
parasite-infected erythrocyte surface protein Caro et al
PF3D7_0532100
early transcribed membrane protein 5 BOTH
PF3D7_0532600 Plasmodium exported protein, unknown function Caro et al
PF3D7_0701900 Plasmodium exported protein, unknown function Caro et al
PF3D7_0831400 Plasmodium exported protein, unknown function Caro et al
PF3D7_0918000
glideosome-associated protein 50 secreted acid phosphatase 3.1.3.2 BOTH
PF3D7_1016700 Plasmodium exported protein (PHISTc), unknown function Caro et al
PF3D7_1021400 endomembrane protein 70, putative Caro et al
PF3D7_1102600 gametocyte exported protein 14 Plasmodium exported protein, unknown function Caro et al
PF3D7_1121600
parasitophorous vacuole membrane antigen QF 116 exported protein 1 circumsporozoite-related antigen Foth et al
PF3D7_1149400 Plasmodium exported protein, unknown function Caro et al
PF3D7_1149500 ring-infected erythrocyte surface antigen 2, pseudogene Caro et al
PF3D7_1200600
erythrocyte membrane protein 1, PfEMP1 Caro et al
PF3D7_1200900
Plasmodium exported protein (PHISTc), unknown function Caro et al
PF3D7_1240100 early transcribed membrane protein 12 Caro et al
PF3D7_1253300 Plasmodium exported protein (PHISTa), unknown function, pseudogene Caro et al
PF3D7_1471100
exported protein 2 Foth et al
PF3D7_1476300 Plasmodium exported protein (PHISTb), unknown function Caro et al
Transport PF3D7_0103200
nucleoside transporter 4, NT4 Caro et al
PF3D7_0419600 ran-specific GTPase-activating protein 1, putative Foth et al
PF3D7_0813700 ABC transporter F family member 1, putative, ABCF1 Caro et al
PF3D7_0914700
apicomplexan amino acid transporter apiat2, putative Caro et al
PF3D7_1132800
aquaglyceroporin Caro et al
PF3D7_1235200
V-type K+-independent H+-translocating inorganic pyrophosphatase, VP2 3.6.1.1 Caro et al
PF3D7_1311900
V-type proton ATPase catalytic subunit A 3.6.3.14 Foth et al
PF3D7_1439000
copper transporter, CTR1 Foth et al
PF3D7_1456800
V-type H(+)-translocating pyrophosphatase, putative, VP1 3.6.1.1 Caro et al
Orgenellar functions PF3D7_0613400 50s ribosomal protein l18, apicoplast, putative Caro et al
PF3D7_0614200 cytosolic Fe-S cluster assembly factor NAR1, putative 1.12.7.2 Caro et al
PF3D7_0827500 ribosomal protein l21, apicoplast, putative Caro et al
PF3D7_1312600
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, putative 1.2.4.4 Caro et al
PF3D7_1429700 ribosomal protein L15, mitochondrial, putative Foth et al
PF3D7_1434800 mitochondrial acidic protein MAM33, putative Caro et al
Unknown function PF3D7_0109000
photosensitized INA-labeled protein PHIL1 Caro et al
PF3D7_0404500 6-cysteine protein p36 Caro et al
PF3D7_1125800 kelch domain-containing protein, putative Caro et al
PF3D7_1226300
haloacid dehalogenase-like hydrolase, putative Foth et al
PF3D7_1302100
gamete antigen 27/25 BOTH
+ 14 conserved Plasmodium protein of unknown function
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