| Histone chaperones | ||||||||||||||||||||
| Adapted from Das C, Tyler JK, Churchill ME. The histone shuffle: histone chaperones in an energetic dance. Trends Biochem Sci. 2010 Sep;35(9):476-89 | ||||||||||||||||||||
| Chaperone classification | Histone chaperone | Binding partners | Function in yeast | |||||||||||||||||
| Chaperone | PfID | Annotation | PfID | Annotation | ||||||||||||||||
| H3–H4 family | Asf1 | PFL1180w | Chromatin assembly protein (ASF1) |
|
H3–H4 dimer | Transcriptional regulation | ||||||||||||||
| CAF-1 | PFE0090w | Chromosome assembly factor 1 |
|
Repair | ||||||||||||||||
| CAF-1 | PFA0520 | chromatin assembly factor 1 protein WD40 domain |
|
|||||||||||||||||
| RFC | PF14_0601 | Replication factor C3 |
|
Transcriptional silencing | ||||||||||||||||
| MCMs (via histones) | PFD0790c | DNA replication licensing factor |
|
Promotes histone acetylation | ||||||||||||||||
| Bdf1 A |
|
Bromodomain protein |
|
Assembly of senescence associated heterochromatin foci | ||||||||||||||||
| TPA | PF11_0053 | Chromatin remodeling protein |
|
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| Vps75 |
|
Nucleosome assembly protein |
|
H3–H4 | Transcriptional regulation | |||||||||||||||
| CAF-1 | PFE0090w | Chromosome assembly factor 1 |
|
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| CAF-1 | PFE0090w | Chromosome assembly factor 1 |
|
H3–H4 | Replication | |||||||||||||||
| p150 | MAL13P1.63 | Eukaryotic translation initation factor 4 gamma |
|
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| Asf1 | PFL1180w | Chromatin assembly protein | Transcriptional silencing | |||||||||||||||||
| HP1 |
|
Chromodomain protein | ||||||||||||||||||
| PCNA |
|
Proliferating cell nuclear antigen |
|
|||||||||||||||||
| RbAp46/48 | PF14_0314 | Chromatin assembly factor 1 P55 subuni |
|
Component of HAT1 | PFD0795w | Histone acetyltransferase |
|
Many aspects of chromatin metabolism and histone modification | ||||||||||||
| CAF-1 | PFE0090w | Chromosome assembly factor 1 |
|
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| CAF-1 | PFA0520 | chromatin assembly factor 1 protein WD40 domain |
|
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| dp55 | PFE0450w | Chromosome condensation protein |
|
NURF | PFA0520c | Chromatin assembly factor 1 protein WD40 domain |
|
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| NURF | PF14_0314 | Chromatin assembly factor 1 P55 subunit |
|
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| NURF | PF13_0149 | Chromatin assembly factor 1 subunit |
|
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| HDAC1 2, 3 complexes |
|
Histone deacetylase | ||||||||||||||||||
| PF14_0690 | Histone deacetylase | |||||||||||||||||||
| FKBP |
|
FK506-binding protein (FKBP)-type peptidyl-propyl isomerase |
|
H3–H4 | ||||||||||||||||
| H2A–H2B fami | PP2Cg |
|
Protein phosphatase 2c |
|
H2A–H2B | |||||||||||||||
| H2A–H2B, H3–H4 family | FACT |
|
Structure specific recognition protein, SSRP1 | H2A–H2B | Replication | |||||||||||||||
| H3–H4 | Repair | |||||||||||||||||||
| RPA | PFD0470c | Replication factor a protein |
|
Transcription | ||||||||||||||||
| MCMs | PF13_0095 | DNA replication licensing factor MCM4-related |
|
Recombination | ||||||||||||||||
|
DNA replication licensing factor MCM2 |
|
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| PFD0790c | DNA replication licensing factor, putative |
|
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|
Replication licensing factor, putative |
|
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| PFL0580w | DNA replication licensing factor MCM5, putative |
|
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| PF07_0023 | DNA replication licensing factor mcm7 homologue, putative |
|
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| PFE1345c | Minichromosome maintenance protein 3, putative |
|
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| SPT16 | PFE0870w | Transcriptional regulator; component of FACT | ||||||||||||||||||
| ANP32B | PF14_0257 | Conserved protein, unknown function; phosphatase inhibitor |
|
H2A–H2B | Transcription | |||||||||||||||
| H3–H4 | Apoptosis | |||||||||||||||||||
| Rep68 | PFE0070w | interspersed repeat antigen |
|
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| KLF5 | PFL0465c | Zinc finger transcription factor (krox1) | ||||||||||||||||||
| Variant histone | Yaf9 | MAL8P1.131 | gas41 homologue |
|
H2AZ–H2B | H2AZ deposition onto DNA | ||||||||||||||
| NuA4 subuni |
|
Histone acetyltransferase |
|
Transcription regulation | ||||||||||||||||
| SWR1 subu | PF08_0048 | ATP-dependent helicase |
|
|||||||||||||||||
| Core/linker histone | NAP1 |
|
Nucleosome assembly protein 1 PfNAPL |
|
H2A–H2B | Histone shuttling | ||||||||||||||
| Articles related to Histone chaperones on-line retrieved from PubMed | ||||||||||||||||||||
| PFID | PFID Old | Annotation | Formal Annotation | EC | Transcript |
|---|---|---|---|---|---|
PF3D7_1033700
|
PF10_0328 | Bromodomain protein | bromodomain protein 2 |
|
|
PF3D7_1433300
|
PF14_0314 | Chromatin assembly factor 1 P55 subunit | histone-binding protein rbbp7, putative, |
|
|
PF3D7_0110700
|
PFA0520c | Chromatin assembly factor 1 protein WD40 domain | chromatin assembly factor 1 subunit c, putative; caf1c; rbap48 |
|
|
| PFA0520 | PFA0520 | chromatin assembly factor 1 protein WD40 domain | PFA0520 | ||
PF3D7_1329300
|
PF13_0149 | Chromatin assembly factor 1 subunit | chromatin assembly factor 1 subunit, putative |
|
|
| PF3D7_1224500 | PFL1180w | Chromatin assembly protein | histone chaperone ASF1 |
|
|
PF3D7_1104200
|
PF11_0053 | Chromatin remodeling protein | chromatin remodeling protein |
|
|
PF3D7_1220900
|
PFL1005c | Chromodomain protein | heterochromatin protein 1 |
|
|
PF3D7_0501800
|
PFE0090w | Chromosome assembly factor 1 | chromatin assembly factor 1 subunit a CAF1A |
|
|
| PF3D7_0416300 | PFD0790c | DNA replication licensing factor | DNA helicase MCM9, putative | 3.6.4.12 |
|
PF3D7_1417800
|
PF14_0177 | DNA replication licensing factor MCM2 | DNA replication licensing factor MCM2 | 3.6.4.12 |
|
| PF3D7_1317100 | PF13_0095 | DNA replication licensing factor MCM4-related | DNA replication licensing factor MCM4 |
|
|
| PF3D7_1211700 | PFL0580w | DNA replication licensing factor MCM5, putative | DNA replication licensing factor MCM5, putative |
|
|
| PF3D7_0705400 | PF07_0023 | DNA replication licensing factor mcm7 homologue, putative | DNA replication licensing factor MCM7 |
|
|
| PF3D7_1312900 | MAL13P1.63 | Eukaryotic translation initation factor 4 gamma | eukaryotic translation initation factor 4 gamma |
|
|
PF3D7_0416400
|
PFD0795w | Histone acetyltransferase | histone acetyltransferase, putative | 2.3.1.48 |
|
PF3D7_1118600
|
PF11_0192 | Histone acetyltransferase | histone acetyltransferase | 2.3.1.48 |
|
PF3D7_0925700
|
PFI1260c | Histone deacetylase | histone deacetylase 1 | 3.5.1.98 |
|
PF3D7_1472200
|
PF14_0690 | Histone deacetylase | histone deacetylase, putative | 3.5.1.98 |
|
| PF3D7_0501400 | PFE0070w | interspersed repeat antigen | interspersed repeat antigen |
|
|
| PF3D7_0527000 | PFE1345c | Minichromosome maintenance protein 3, putative | DNA replication licensing factor MCM3, putative |
|
|
PF3D7_1361900
|
PF13_0328 | Proliferating cell nuclear antigen 1 | proliferating cell nuclear antigen 1 |
|
|
| PF3D7_0409600 | PFD0475c | Replication factor a protein | replication protein A1, large subunit |
|
|
PF3D7_1463200
|
PF14_0601 | Replication factor C3 | replication factor C subunit 3, putative |
|
|
PF3D7_1355100
|
PF13_0291 | Replication licensing factor, putative | DNA replication licensing factor MCM6 |
|
|
PF3D7_0820000
|
PF08_0048 | Snf2-related CBP activator | helicase SRCAP, putative Snf2-related CBP activator, putative |
|
|
PF3D7_1209300
|
PFL0465c | telomere repeat-binding zinc finger protein, putative | telomere repeat-binding zinc finger protein, putative |
|
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PFA0520c
|
chromatin assembly factor 1 subunit c, putative; caf1c; rbap48 |
| 2 | PFA0520 | PFA0520 |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PFD0475c | replication protein A1, large subunit |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PFD0790c | DNA helicase MCM9, putative |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PFD0795w
|
histone acetyltransferase, putative |
| 2 |
PF11_0192
|
histone acetyltransferase |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PFE0070w | interspersed repeat antigen |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PFE0090w
|
chromatin assembly factor 1 subunit a CAF1A |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PFE1345c | DNA replication licensing factor MCM3, putative |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PF07_0023 | DNA replication licensing factor MCM7 |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF08_0048
|
helicase SRCAP, putative Snf2-related CBP activator, putative |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PFI1260c
|
histone deacetylase 1 |
| 2 |
PF14_0690
|
histone deacetylase, putative |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF10_0328
|
bromodomain protein 2 |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF11_0053
|
chromatin remodeling protein |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PFL0465c
|
telomere repeat-binding zinc finger protein, putative |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PFL0580w | DNA replication licensing factor MCM5, putative |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PFL1005c
|
heterochromatin protein 1 |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PFL1180w | histone chaperone ASF1 |
| # | PFID | Formal Name |
|---|---|---|
| 1 | MAL13P1.63 | eukaryotic translation initation factor 4 gamma |
| # | PFID | Formal Name |
|---|---|---|
| 1 | PF13_0095 | DNA replication licensing factor MCM4 |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF13_0149
|
chromatin assembly factor 1 subunit, putative |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF13_0291
|
DNA replication licensing factor MCM6 |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF13_0328
|
proliferating cell nuclear antigen 1 |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF14_0177
|
DNA replication licensing factor MCM2 |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF14_0314
|
histone-binding protein rbbp7, putative, |
| # | PFID | Formal Name |
|---|---|---|
| 1 |
PF14_0601
|
replication factor C subunit 3, putative |