Histone chaperones | ||||||||||||||||||||
Adapted from Das C, Tyler JK, Churchill ME. The histone shuffle: histone chaperones in an energetic dance. Trends Biochem Sci. 2010 Sep;35(9):476-89 | ||||||||||||||||||||
Chaperone classification | Histone chaperone | Binding partners | Function in yeast | |||||||||||||||||
Chaperone | PfID | Annotation | PfID | Annotation | ||||||||||||||||
H3–H4 family | Asf1 | PFL1180w | Chromatin assembly protein (ASF1) |
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H3–H4 dimer | Transcriptional regulation | ||||||||||||||
CAF-1 | PFE0090w | Chromosome assembly factor 1 |
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Repair | ||||||||||||||||
CAF-1 | PFA0520 | chromatin assembly factor 1 protein WD40 domain |
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RFC | PF14_0601 | Replication factor C3 |
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Transcriptional silencing | ||||||||||||||||
MCMs (via histones) | PFD0790c | DNA replication licensing factor |
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Promotes histone acetylation | ||||||||||||||||
Bdf1 A |
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Bromodomain protein |
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Assembly of senescence associated heterochromatin foci | ||||||||||||||||
TPA | PF11_0053 | Chromatin remodeling protein |
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Vps75 |
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Nucleosome assembly protein |
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H3–H4 | Transcriptional regulation | |||||||||||||||
CAF-1 | PFE0090w | Chromosome assembly factor 1 |
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CAF-1 | PFE0090w | Chromosome assembly factor 1 |
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H3–H4 | Replication | |||||||||||||||
p150 | MAL13P1.63 | Eukaryotic translation initation factor 4 gamma |
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Asf1 | PFL1180w | Chromatin assembly protein | Transcriptional silencing | |||||||||||||||||
HP1 |
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Chromodomain protein | ||||||||||||||||||
PCNA |
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Proliferating cell nuclear antigen |
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RbAp46/48 | PF14_0314 | Chromatin assembly factor 1 P55 subuni |
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Component of HAT1 | PFD0795w | Histone acetyltransferase |
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Many aspects of chromatin metabolism and histone modification | ||||||||||||
CAF-1 | PFE0090w | Chromosome assembly factor 1 |
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CAF-1 | PFA0520 | chromatin assembly factor 1 protein WD40 domain |
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dp55 | PFE0450w | Chromosome condensation protein |
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NURF | PFA0520c | Chromatin assembly factor 1 protein WD40 domain |
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NURF | PF14_0314 | Chromatin assembly factor 1 P55 subunit |
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NURF | PF13_0149 | Chromatin assembly factor 1 subunit |
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HDAC1 2, 3 complexes |
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Histone deacetylase |
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PF14_0690 | Histone deacetylase | |||||||||||||||||||
FKBP |
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FK506-binding protein (FKBP)-type peptidyl-propyl isomerase |
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H3–H4 | ||||||||||||||||
H2A–H2B fami | PP2Cg |
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Protein phosphatase 2c |
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H2A–H2B | |||||||||||||||
H2A–H2B, H3–H4 family | FACT |
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Structure specific recognition protein, SSRP1 | H2A–H2B | Replication | |||||||||||||||
H3–H4 | Repair | |||||||||||||||||||
RPA | PFD0470c | Replication factor a protein |
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Transcription | ||||||||||||||||
MCMs | PF13_0095 | DNA replication licensing factor MCM4-related |
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Recombination | ||||||||||||||||
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DNA replication licensing factor MCM2 |
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PFD0790c | DNA replication licensing factor, putative |
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Replication licensing factor, putative |
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PFL0580w | DNA replication licensing factor MCM5, putative |
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PF07_0023 | DNA replication licensing factor mcm7 homologue, putative |
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PFE1345c | Minichromosome maintenance protein 3, putative |
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SPT16 | PFE0870w | Transcriptional regulator; component of FACT | ||||||||||||||||||
ANP32B | PF14_0257 | Conserved protein, unknown function; phosphatase inhibitor |
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H2A–H2B | Transcription | |||||||||||||||
H3–H4 | Apoptosis | |||||||||||||||||||
Rep68 | PFE0070w | interspersed repeat antigen |
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KLF5 | PFL0465c | Zinc finger transcription factor (krox1) | ||||||||||||||||||
Variant histone | Yaf9 | MAL8P1.131 | gas41 homologue |
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H2AZ–H2B | H2AZ deposition onto DNA | ||||||||||||||
NuA4 subuni |
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Histone acetyltransferase |
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Transcription regulation | ||||||||||||||||
SWR1 subu | PF08_0048 | ATP-dependent helicase |
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Core/linker histone | NAP1 |
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Nucleosome assembly protein 1 PfNAPL |
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H2A–H2B | Histone shuttling | ||||||||||||||
Articles related to Histone chaperones on-line retrieved from PubMed |
PFID | PFID Old | Annotation | Formal Annotation | EC | Transcript |
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PF3D7_1033700 | PF10_0328 | Bromodomain protein | bromodomain protein 2 | ||
PF3D7_1433300 | PF14_0314 | Chromatin assembly factor 1 P55 subunit | histone-binding protein rbbp7, putative, | ||
PF3D7_0110700 | PFA0520c | Chromatin assembly factor 1 protein WD40 domain | chromatin assembly factor 1 subunit c, putative; caf1c; rbap48 | ||
PFA0520 | PFA0520 | chromatin assembly factor 1 protein WD40 domain | PFA0520 | ||
PF3D7_1329300 | PF13_0149 | Chromatin assembly factor 1 subunit | chromatin assembly factor 1 subunit, putative | ||
PF3D7_1224500 | PFL1180w | Chromatin assembly protein | histone chaperone ASF1 | ||
PF3D7_1104200 | PF11_0053 | Chromatin remodeling protein | chromatin remodeling protein | ||
PF3D7_1220900 | PFL1005c | Chromodomain protein | heterochromatin protein 1 | ||
PF3D7_0501800 | PFE0090w | Chromosome assembly factor 1 | chromatin assembly factor 1 subunit a CAF1A | ||
PF3D7_0416300 | PFD0790c | DNA replication licensing factor | DNA helicase MCM9, putative | 3.6.4.12 | |
PF3D7_1417800 | PF14_0177 | DNA replication licensing factor MCM2 | DNA replication licensing factor MCM2 | 3.6.4.12 | |
PF3D7_1317100 | PF13_0095 | DNA replication licensing factor MCM4-related | DNA replication licensing factor MCM4 | ||
PF3D7_1211700 | PFL0580w | DNA replication licensing factor MCM5, putative | DNA replication licensing factor MCM5, putative | ||
PF3D7_0705400 | PF07_0023 | DNA replication licensing factor mcm7 homologue, putative | DNA replication licensing factor MCM7 | ||
PF3D7_1312900 | MAL13P1.63 | Eukaryotic translation initation factor 4 gamma | eukaryotic translation initation factor 4 gamma | ||
PF3D7_0416400 | PFD0795w | Histone acetyltransferase | histone acetyltransferase, putative | 2.3.1.48 | |
PF3D7_1118600 | PF11_0192 | Histone acetyltransferase | histone acetyltransferase | 2.3.1.48 | |
PF3D7_0925700 | PFI1260c | Histone deacetylase | histone deacetylase 1 | 3.5.1.98 | |
PF3D7_1472200 | PF14_0690 | Histone deacetylase | histone deacetylase, putative | 3.5.1.98 | |
PF3D7_0501400 | PFE0070w | interspersed repeat antigen | interspersed repeat antigen | ||
PF3D7_0527000 | PFE1345c | Minichromosome maintenance protein 3, putative | DNA replication licensing factor MCM3, putative | ||
PF3D7_1361900 | PF13_0328 | Proliferating cell nuclear antigen 1 | proliferating cell nuclear antigen 1 | ||
PF3D7_0409600 | PFD0475c | Replication factor a protein | replication protein A1, large subunit | ||
PF3D7_1463200 | PF14_0601 | Replication factor C3 | replication factor C subunit 3, putative | ||
PF3D7_1355100 | PF13_0291 | Replication licensing factor, putative | DNA replication licensing factor MCM6 | ||
PF3D7_0820000 | PF08_0048 | Snf2-related CBP activator | helicase SRCAP, putative Snf2-related CBP activator, putative | ||
PF3D7_1209300 | PFL0465c | telomere repeat-binding zinc finger protein, putative | telomere repeat-binding zinc finger protein, putative |
# | PFID | Formal Name |
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1 | PFA0520c | chromatin assembly factor 1 subunit c, putative; caf1c; rbap48 |
2 | PFA0520 | PFA0520 |
# | PFID | Formal Name |
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1 | PFD0475c | replication protein A1, large subunit |
# | PFID | Formal Name |
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1 | PFD0790c | DNA helicase MCM9, putative |
# | PFID | Formal Name |
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1 | PFD0795w | histone acetyltransferase, putative |
2 | PF11_0192 | histone acetyltransferase |
# | PFID | Formal Name |
---|---|---|
1 | PFE0070w | interspersed repeat antigen |
# | PFID | Formal Name |
---|---|---|
1 | PFE0090w | chromatin assembly factor 1 subunit a CAF1A |
# | PFID | Formal Name |
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1 | PFE1345c | DNA replication licensing factor MCM3, putative |
# | PFID | Formal Name |
---|---|---|
1 | PF07_0023 | DNA replication licensing factor MCM7 |
# | PFID | Formal Name |
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1 | PF08_0048 | helicase SRCAP, putative Snf2-related CBP activator, putative |
# | PFID | Formal Name |
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1 | PFI1260c | histone deacetylase 1 |
2 | PF14_0690 | histone deacetylase, putative |
# | PFID | Formal Name |
---|---|---|
1 | PF10_0328 | bromodomain protein 2 |
# | PFID | Formal Name |
---|---|---|
1 | PF11_0053 | chromatin remodeling protein |
# | PFID | Formal Name |
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1 | PFL0465c | telomere repeat-binding zinc finger protein, putative |
# | PFID | Formal Name |
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1 | PFL0580w | DNA replication licensing factor MCM5, putative |
# | PFID | Formal Name |
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1 | PFL1005c | heterochromatin protein 1 |
# | PFID | Formal Name |
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1 | PFL1180w | histone chaperone ASF1 |
# | PFID | Formal Name |
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1 | MAL13P1.63 | eukaryotic translation initation factor 4 gamma |
# | PFID | Formal Name |
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1 | PF13_0095 | DNA replication licensing factor MCM4 |
# | PFID | Formal Name |
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1 | PF13_0149 | chromatin assembly factor 1 subunit, putative |
# | PFID | Formal Name |
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1 | PF13_0291 | DNA replication licensing factor MCM6 |
# | PFID | Formal Name |
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1 | PF13_0328 | proliferating cell nuclear antigen 1 |
# | PFID | Formal Name |
---|---|---|
1 | PF14_0177 | DNA replication licensing factor MCM2 |
# | PFID | Formal Name |
---|---|---|
1 | PF14_0314 | histone-binding protein rbbp7, putative, |
# | PFID | Formal Name |
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1 | PF14_0601 | replication factor C subunit 3, putative |